SSRP1 - structure specific recognition protein 1 Gene
Also Known as FACT; T160; FACT80
Species: Homo sapiens
About SSRP1
This gene has 5 transcripts (splice variants), 232 orthologues and 20 paralogues. Ubiquitous expression in lymph node (RPKM 33.5), ovary (RPKM 32.7) and 25 other tissues.
Summary
The protein encoded by this gene is a subunit of a heterodimer that, along with SUPT16H, forms chromatin transcriptional elongation factor FACT. FACT interacts specifically with histones H2A/H2B to effect nucleosome disassembly and transcription elongation. FACT and cisplatin-damaged DNA may be crucial to the Anticancer mechanism of cisplatin. This encoded protein contains a high mobility group box which most likely constitutes the structure recognition element for cisplatin-modified DNA. This protein also functions as a co-activator of the transcriptional activator p63. An alternatively spliced transcript variant of this gene has been described, but its full-length nature is not known. [provided by RefSeq, Jul 2008]
SSRP1 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_003146.3 | NP_003137.1 | FACT complex subunit SSRP1 |
| Molecular Function GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
16902406 | GOA |
| Biological Process GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| involved in nucleosome disassembly |
IDA
IDA: Inferred from direct assay
|
16902406 | GOA |
| involved in regulation of chromatin organization |
IDA
IDA: Inferred from direct assay
|
27467129 | GOA |
| Cellular Component GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| part of FACT complex |
IPI
IPI: Inferred from physical interaction
|
16902406 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
9489704 | GOA |
SSRP1 Protein Structure
SSrecog: Structure-specific recognition protein (SSRP1) (74 - 283)
Rtt106: Histone chaperone Rttp106-like (339 - 427)
HMG_box: HMG (high mobility group) box (547 - 615)
- 0
- 200
- 400
- 600
- 709 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
FACT complex subunit SSRP1 |
|
SSRP1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | Verweise |
|---|---|---|---|---|---|---|---|
|
Intra
|
SSRP1 | Q08945 | SUPT16H | Homo sapiens | Q9Y5B9 | 19214185 | |
|
Intra
|
SSRP1 | Q08945 | SUPT16H | Homo sapiens | Q9Y5B9 | 33961781 | |
|
Intra
|
SSRP1 | Q08945 | SUPT16H | Homo sapiens | Q9Y5B9 | 28514442 | |
|
Intra
|
SSRP1 | Q08945 | SUPT16H | Homo sapiens | Q9Y5B9 | 24981860 | |
|
Intra
|
SSRP1 | Q08945 | SUPT16H | Homo sapiens | Q9Y5B9 | 16902406 | |
|
Intra
|
SSRP1 | Q08945 | SUPT16H | Homo sapiens | Q9Y5B9 | 35271311 | |
|
Intra
|
SSRP1 | Q08945 | H2BC21 | Homo sapiens | Q16778 | 30021884 | |
|
Intra
|
SSRP1 | Q08945 | H2BC21 | Homo sapiens | Q16778 | 35271311 | |
|
Intra
|
SSRP1 | Q08945 | CSNK2A1 | Homo sapiens | P68400 | 28514442 | |
|
Intra
|
SSRP1 | Q08945 | CSNK2A1 | Homo sapiens | P68400 | 35271311 | |
|
Intra
|
SSRP1 | Q08945 | MCM7 | Homo sapiens | P33993 | 35271311 | |
|
Intra
|
SSRP1 | Q08945 | MCM7 | Homo sapiens | P33993 | 28514442 | |
|
Intra
|
SSRP1 | Q08945 | MCM2 | Homo sapiens | P49736 | 24981860 | |
|
Intra
|
SSRP1 | Q08945 | MCM2 | Homo sapiens | P49736 | 28514442 | |
|
Intra
|
SSRP1 | Q08945 | MCM2 | Homo sapiens | P49736 | 35271311 | |
|
Intra
|
SSRP1 | Q08945 | MCM2 | Homo sapiens | P49736 | 16902406 | |
|
Intra
|
SSRP1 | Q08945 | MCM6 | Homo sapiens | Q14566 | 35271311 | |
|
Intra
|
SSRP1 | Q08945 | MCM6 | Homo sapiens | Q14566 | 16902406 | |
|
Intra
|
SSRP1 | Q08945 | MCM6 | Homo sapiens | Q14566 | 28514442 | |
|
Intra
|
SSRP1 | Q08945 | MCM4 | Homo sapiens | P33991 | 16902406 | |
|
Intra
|
SSRP1 | Q08945 | MCM4 | Homo sapiens | P33991 | 28514442 | |
|
Intra
|
SSRP1 | Q08945 | MCM4 | Homo sapiens | P33991 | 33961781 | |
|
Intra
|
SSRP1 | Q08945 | MCM4 | Homo sapiens | P33991 | 16902406 | |
|
Intra
|
SSRP1 | Q08945 | MCM4 | Homo sapiens | P33991 | 35271311 |
SSRP1 Antibodies
| Art. -Nr. | Produktname | Anwendung | Reactivity |
|---|---|---|---|
| HY-P810246 | SSRP1 Antibody (YA9590) | WB, IP | human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Lupus Erythematosus |
|
|
| Systemic Lupus Erythematosus |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | SSRP1 | MGD | MGI:107912 |
| Felis catus | SSRP1 | VGNC | VGNC:65710 |
| Canis familiaris | SSRP1 | VGNC | VGNC:46841 |
| Rattus norvegicus | SSRP1 | RGD | RGD:621143 |
| Bos taurus | SSRP1 | VGNC | VGNC:35323 |
| Macaca mulatta | SSRP1 | VGNC | VGNC:77891 |
| Others | SSRP1 | NCBI |