FUBP1 - far upstream element binding protein 1 Gene
Also Known as FBP; FUBP; hDH V
Species: Homo sapiens
About FUBP1
This gene has 15 transcripts (splice variants), 181 orthologues, 12 paralogues and is associated with 80 phenotypes. Ubiquitous expression in lymph node (RPKM 23.3), bone marrow (RPKM 20.3) and 25 other tissues.
Summary
The protein encoded by this gene is a single stranded DNA-binding protein that binds to multiple DNA elements, including the far upstream element (FUSE) located upstream of c-Myc. Binding to FUSE occurs on the non-coding strand, and is important to the regulation of c-Myc in undifferentiated cells. This protein contains three domains, an amphipathic helix N-terminal domain, a DNA-binding central domain, and a C-terminal transactivation domain that contains three tyrosine-rich motifs. The N-terminal domain is thought to repress the activity of the C-terminal domain. This protein is also thought to bind RNA, and contains 3'-5' helicase activity with in vitro activity on both DNA-DNA and RNA-RNA duplexes. Aberrant expression of this gene has been found in malignant tissues, and this gene is important to neural system and lung development. Binding of this protein to viral RNA is thought to play a role in several viral diseases, including hepatitis C and hand, foot and mouth disease. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]
FUBP1 Products (6)
| mRNA | Protein | Name |
|---|---|---|
| NM_001303433.2 | NP_001290362.1 | far upstream element-binding protein 1 isoform 1 |
| NM_001376055.1 | NP_001362984.1 | far upstream element-binding protein 1 isoform 3 |
| NM_001376056.1 | NP_001362985.1 | far upstream element-binding protein 1 isoform 4 |
| NM_001376057.1 | NP_001362986.1 | far upstream element-binding protein 1 isoform 5 |
| NM_001410804.1 | NP_001397733.1 | far upstream element-binding protein 1 isoform 6 |
| NM_003902.5 | NP_003893.2 | far upstream element-binding protein 1 isoform 2 |
| Molecular Function GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
20711187 | GOA |
| Biological Process GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| involved in positive regulation of gene expression |
IDA
IDA: Inferred from direct assay
|
19087307 | GOA |
| Cellular Component GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
19087307 | GOA |
FUBP1 Protein Structure
KH_1: KH domain (102 - 164)
KH_1: KH domain (188 - 251)
KH_1: KH domain (280 - 339)
KH_1: KH domain (380 - 443)
DUF1897: Domain of unknown function (DUF1897) (573 - 595)
DUF1897: Domain of unknown function (DUF1897) (601 - 632)
- 0
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- 644 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
far upstream element-binding protein 1 |
|
FUBP1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | Verweise |
|---|---|---|---|---|---|---|---|
|
Intra
|
FUBP1 | Q96AE4 | USP22 | Homo sapiens | Q9UPT9 | 21779003 | |
|
Intra
|
FUBP1 | Q96AE4 | USP22 | Homo sapiens | Q9UPT9 | 21779003 | |
|
Intra
|
FUBP1 | Q96AE4 | AIMP2 | Homo sapiens | Q13155 | 21285945 | |
|
Intra
|
FUBP1 | Q96AE4 | AIMP2 | Homo sapiens | Q13155 | 21285945 |
FUBP1 Antibodies
| Art. -Nr. | Produktname | Anwendung | Reactivity |
|---|---|---|---|
| HY-P81374 | FUBP1 Antibody (YA1119) | IHC-P | Human |
| HY-P81374A | FUBP1 Antibody (YA1119)(PBS only) | IHC-P | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Hand, Foot And Mouth Disease |
|
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| Childhood Oligodendroglioma |
|
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| Oligodendroglioma |
|
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| Temporal Lobe Neoplasm |
|
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| Adult Oligodendroglioma |
|
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| Mixed Glioma |
|
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| Mouth Disease |
|
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| Chordoid Glioma |
|
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| Brain Glioma |
|
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| Diffuse Astrocytoma |
|
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| Anaplastic Oligodendroglioma |
|
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| Low Grade Glioma |
|
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| Central Nervous System Benign Neoplasm |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Bos taurus | FUBP1 | VGNC | VGNC:55193 |
| Felis catus | FUBP1 | VGNC | VGNC:80212 |
| Macaca mulatta | FUBP1 | VGNC | VGNC:99956 |
| Mus musculus | FUBP1 | MGD | MGI:1196294 |
| Rattus norvegicus | FUBP1 | RGD | RGD:1591892 |
| Others | FUBP1 | NCBI |