ACIN1 - apoptotic chromatin condensation inducer 1 Gene
Also Known as ACN; ACINUS; fSAP152
Species: Homo sapiens
About ACIN1
This gene has 23 transcripts (splice variants) and 263 orthologues. Ubiquitous expression in bone marrow (RPKM 24.7), spleen (RPKM 23.3) and 25 other tissues.
Summary
Apoptosis is defined by several morphologic nuclear changes, including chromatin condensation and nuclear fragmentation. This gene encodes a nuclear protein that induces apoptotic chromatin condensation after activation by Caspase-3, without inducing DNA fragmentation. This protein has also been shown to be a component of a splicing-dependent multiprotein exon junction complex (EJC) that is deposited at splice junctions on mRNAs, as a consequence of pre-mRNA splicing. It may thus be involved in mRNA metabolism associated with splicing. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Oct 2011]
ACIN1 Products (6)
| mRNA | Protein | Name |
|---|---|---|
| NM_001164814.1 | NP_001158286.1 | apoptotic chromatin condensation inducer in the nucleus isoform 2 |
| NM_001164815.1 | NP_001158287.1 | apoptotic chromatin condensation inducer in the nucleus isoform 3 |
| NM_001164816.2 | NP_001158288.1 | apoptotic chromatin condensation inducer in the nucleus isoform 4 |
| NM_001164817.2 | NP_001158289.1 | apoptotic chromatin condensation inducer in the nucleus isoform 5 |
| NM_001386863.1 | NP_001373792.1 | apoptotic chromatin condensation inducer in the nucleus isoform 6 |
| NM_014977.3 | NP_055792.1 | apoptotic chromatin condensation inducer in the nucleus isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
17332742 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in apoptotic chromosome condensation |
IDA
IDA: Inferred from direct assay
|
10490026 | GOA |
| involved in erythrocyte differentiation |
IEP
IEP: Inferred from expression pattern
|
11208865 | GOA |
| involved in negative regulation of mRNA splicing, via spliceosome |
IDA
IDA: Inferred from direct assay
|
12665594 | GOA |
| involved in positive regulation of apoptotic process |
IDA
IDA: Inferred from direct assay
|
12665594 | GOA |
| involved in positive regulation of monocyte differentiation |
IEP
IEP: Inferred from expression pattern
|
12393560 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of ASAP complex |
IDA
IDA: Inferred from direct assay
|
12665594 | GOA |
| part of exon-exon junction complex |
IDA
IDA: Inferred from direct assay
|
16314458 | GOA |
| located in nuclear speck |
IDA
IDA: Inferred from direct assay
|
20966198 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
10490026 | GOA |
ACIN1 Protein Structure
SAP: SAP domain (72 - 106)
RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (1028 - 1078)
- 0
- 300
- 600
- 900
- 1200
- 1341 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
apoptotic chromatin condensation inducer in the nucleus |
|
ACIN1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
ACIN1 | Q9UKV3 | SF3A2 | Homo sapiens | Q15428 | 17332742 | |
|
Intra
|
ACIN1 | Q9UKV3 | PCBD1 | Homo sapiens | P61457 | 20195357 | |
|
Intra
|
ACIN1 | Q9UKV3 | PCBD1 | Homo sapiens | P61457 | 20195357 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Large Cell Acanthoma |
|
|
| Pilar Sheath Acanthoma |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Canis familiaris | ACIN1 | VGNC | VGNC:37507 |
| Macaca mulatta | ACIN1 | VGNC | VGNC:69437 |
| Rattus norvegicus | ACIN1 | RGD | RGD:1311945 |
| Mus musculus | ACIN1 | MGD | MGI:1891824 |
| Bos taurus | ACIN1 | VGNC | VGNC:25539 |
| Felis catus | ACIN1 | VGNC | VGNC:59509 |
| Others | ACIN1 | NCBI |