GABPA - GA binding protein transcription factor subunit alpha Gene
Also Known as NFT2; NRF2; NRF2A; E4TF1A; E4TF1-60; RCH04A07
Species: Homo sapiens
About GABPA
This gene has 3 transcripts (splice variants), 214 orthologues and 28 paralogues. Ubiquitous expression in thyroid (RPKM 13.9), endometrium (RPKM 11.3) and 25 other tissues.
Summary
This gene encodes one of three GA-binding protein transcription factor subunits which functions as a DNA-binding subunit. Since this subunit shares identity with a subunit encoding the nuclear respiratory factor 2 gene, it is likely involved in activation of cytochrome oxidase expression and nuclear control of mitochondrial function. This subunit also shares identity with a subunit constituting the transcription factor E4TF1, responsible for expression of the adenovirus E4 gene. Because of its chromosomal localization and ability to form heterodimers with Other polypeptides, this gene may play a role in the Down Syndrome phenotype. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Oct 2010]
GABPA Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001197297.2 | NP_001184226.1 | GA-binding protein alpha chain |
| NM_002040.4 | NP_002031.2 | GA-binding protein alpha chain |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables DNA-binding transcription activator activity, RNA polymerase II-specific |
IDA
IDA: Inferred from direct assay
|
12750007 | GOA |
| enables RNA polymerase II cis-regulatory region sequence-specific DNA binding |
IDA
IDA: Inferred from direct assay
|
12750007 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
10675337 | GOA |
| enables sequence-specific double-stranded DNA binding |
IDA
IDA: Inferred from direct assay
|
28473536 | GOA |
| enables transcription cis-regulatory region binding |
IDA
IDA: Inferred from direct assay
|
9857059 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| acts upstream of or within positive regulation of transcription by RNA polymerase II |
IDA
IDA: Inferred from direct assay
|
9857059 | GOA |
| involved in positive regulation of transcription by RNA polymerase II |
IDA
IDA: Inferred from direct assay
|
12750007 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in chromatin |
IDA
IDA: Inferred from direct assay
|
22306510 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
9857059 | GOA |
GABPA Protein Structure
GABP-alpha: GA-binding protein alpha chain (35 - 122)
SAM_PNT: Sterile alpha motif (SAM)/Pointed domain (171 - 250)
Ets: Ets-domain (319 - 401)
- 0
- 100
- 200
- 300
- 400
- 454 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
GA-binding protein alpha chain |
|
GABPA Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
GABPA | Q06546 | ZC2HC1B | Homo sapiens | Q5TFG8 | 32296183 | |
|
Intra
|
GABPA | Q06546 | ZC2HC1B | Homo sapiens | Q5TFG8 | 32296183 | |
|
Intra
|
GABPA | Q06546 | ZC2HC1B | Homo sapiens | Q5TFG8 | 32296183 | |
|
Intra
|
GABPA | Q06546 | GABPB1 | Homo sapiens | Q06547 | 33961781 | |
|
Intra
|
GABPA | Q06546 | GABPB1 | Homo sapiens | Q06547 | 32296183 | |
|
Intra
|
GABPA | Q06546 | STK16 | Homo sapiens | O75716 | 32296183 | |
|
Intra
|
GABPA | Q06546 | STK16 | Homo sapiens | O75716 | 32296183 | |
|
Intra
|
GABPA | Q06546 | GABPB2 | Homo sapiens | Q8TAK5 | 32296183 | |
|
Intra
|
GABPA | Q06546 | GABPB2 | Homo sapiens | Q8TAK5 | 33961781 |
GABPA Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P84498 | GABPA Antibody (YA4195) | WB, ICC/IF, ELISA | Human, Mouse |
| HY-P84498A | GABPA Antibody (YA4195)(PBS only) | WB, ICC/IF, ELISA | Human, Mouse |
| HY-P85178 | GABPA Antibody (YA4870) | WB, ICC/IF, ELISA | Human, Mouse |
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Canis familiaris | GABPA | VGNC | VGNC:41050 |
| Mus musculus | GABPA | MGD | MGI:95610 |
| Rattus norvegicus | GABPA | RGD | RGD:1310802 |
| Bos taurus | GABPA | VGNC | VGNC:29189 |
| Macaca mulatta | GABPA | VGNC | VGNC:72844 |
| Felis catus | GABPA | VGNC | VGNC:62416 |
| Others | GABPA | NCBI |