ATP6V1D - ATPase H+ transporting V1 subunit D Gene
Also Known as VATD; VMA8; ATP6M
Species: Homo sapiens
About ATP6V1D
This gene has 14 transcripts (splice variants) and 227 orthologues. Ubiquitous expression in adrenal (RPKM 49.7), brain (RPKM 46.5) and 25 other tissues.
Summary
This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c", and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This gene encodes the V1 domain D subunit protein. [provided by RefSeq, Jul 2008]
ATP6V1D Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_015994.4 | NP_057078.1 | V-type proton ATPase subunit D |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
18752060 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in cilium assembly |
IMP
IMP: Inferred from mutant phenotype
|
21844891 | GOA |
| involved in protein localization to cilium |
IMP
IMP: Inferred from mutant phenotype
|
21844891 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| colocalizes with centrosome |
IDA
IDA: Inferred from direct assay
|
21844891 | GOA |
| colocalizes with cilium |
IDA
IDA: Inferred from direct assay
|
21844891 | GOA |
| located in membrane |
IDA
IDA: Inferred from direct assay
|
18752060 | GOA |
| part of proton-transporting V-type ATPase complex |
IDA
IDA: Inferred from direct assay
|
18752060 | GOA |
ATP6V1D Protein Structure
ATP-synt_D: ATP synthase subunit D (14 - 208)
- 0
- 100
- 200
- 247 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
V-type proton ATPase subunit D |
|
ATP6V1D Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
ATP6V1D | Q9Y5K8 | HAUS1 | Homo sapiens | Q96CS2 | 32296183 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | HAUS1 | Homo sapiens | Q96CS2 | 32296183 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | VPS52 | Homo sapiens | Q8N1B4 | 25416956 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | VPS52 | Homo sapiens | Q8N1B4 | 25416956 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | VPS52 | Homo sapiens | Q8N1B4 | 32296183 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | VPS52 | Homo sapiens | Q8N1B4 | 32296183 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | KRT27 | Homo sapiens | Q7Z3Y8 | 32296183 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | KRT27 | Homo sapiens | Q7Z3Y8 | 32296183 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | ATP6V1F | Homo sapiens | Q16864 | 33961781 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | BBLN | Homo sapiens | Q9BUW7 | 32296183 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | BBLN | Homo sapiens | Q9BUW7 | 33961781 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | BBLN | Homo sapiens | Q9BUW7 | 32296183 | |
|
Intra
|
ATP6V1D | Q9Y5K8 | BBLN | Homo sapiens | Q9BUW7 | 32296183 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Cerebritis |
|
|
| N Syndrome |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | ATP6V1D | MGD | MGI:1921084 |
| Rattus norvegicus | ATP6V1D | RGD | RGD:735119 |
| Macaca mulatta | ATP6V1D | VGNC | VGNC:70060 |
| Bos taurus | ATP6V1D | VGNC | VGNC:26321 |
| Canis familiaris | ATP6V1D | VGNC | VGNC:38280 |
| Felis catus | ATP6V1D | VGNC | VGNC:81032 |
| Others | ATP6V1D | NCBI |