MBD3 - methyl-CpG binding domain protein 3 Gene
Species: Homo sapiens
About MBD3
This gene has 11 transcripts (splice variants), 234 orthologues and 8 paralogues. Ubiquitous expression in placenta (RPKM 23.4), fat (RPKM 18.3) and 25 other tissues.
Summary
DNA methylation is the major modification of eukaryotic genomes and plays an essential role in mammalian development. This gene belongs to a family of nuclear proteins which are characterized by the presence of a methyl-CpG binding domain (MBD). The encoded protein is a subunit of the NuRD, a multisubunit complex containing nucleosome remodeling and histone deacetylase activities. Unlike the Other family members, the encoded protein is not capable of binding to methylated DNA. The protein mediates the association of metastasis-associated protein 2 with the core histone deacetylase complex. Alternative splicing results in multiple transcript variants of this gene. [provided by RefSeq, Jul 2013]
MBD3 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001281453.2 | NP_001268382.1 | methyl-CpG-binding domain protein 3 isoform 1 |
| NM_001281454.2 | NP_001268383.1 | methyl-CpG-binding domain protein 3 isoform 2 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables methyl-CpG binding |
IDA
IDA: Inferred from direct assay
|
24307175 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
12183469 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in chromatin remodeling |
IDA
IDA: Inferred from direct assay
|
9790534 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of NuRD complex |
IDA
IDA: Inferred from direct assay
|
33283408 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
15701600 | GOA |
MBD3 Protein Structure
MBD: Methyl-CpG binding domain (1 - 69)
MBD_C: C-terminal domain of methyl-CpG binding protein 2 and 3 (150 - 243)
- 0
- 100
- 200
- 291 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
methyl-CpG-binding domain protein 3 |
|
MBD3 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
MBD3 | O95983 | ZNF277 | Homo sapiens | Q8WWA6 | 25416956 | |
|
Intra
|
MBD3 | O95983 | ZNF277 | Homo sapiens | Q8WWA6 | 25416956 | |
|
Intra
|
MBD3 | O95983 | ZNF277 | Homo sapiens | Q8WWA6 | 25416956 | |
|
Intra
|
MBD3 | O95983 | ICA1 | Homo sapiens | Q05084 | 25416956 | |
|
Intra
|
MBD3 | O95983 | ICA1 | Homo sapiens | Q05084 | 25416956 | |
|
Intra
|
MBD3 | O95983 | TRIM54 | Homo sapiens | Q9BYV2 | 25416956 | |
|
Intra
|
MBD3 | O95983 | HDAC1 | Homo sapiens | Q13547 | 25123934 | |
|
Intra
|
MBD3 | O95983 | HDAC1 | Homo sapiens | Q13547 | 24048479 | |
|
Intra
|
MBD3 | O95983 | HDAC1 | Homo sapiens | Q13547 | 25123934 | |
|
Intra
|
MBD3 | O95983 | MYC | Homo sapiens | P01106 | 24048479 | |
|
Intra
|
MBD3 | O95983 | POU5F1 | Homo sapiens | Q01860 | 24048479 | |
|
Intra
|
MBD3 | O95983 | SOX2 | Homo sapiens | P48431 | 24048479 | |
|
Intra
|
MBD3 | O95983 | GOLGA2 | Homo sapiens | Q08379 | 25416956 | |
|
Intra
|
MBD3 | O95983 | GOLGA2 | Homo sapiens | Q08379 | 25416956 | |
|
Intra
|
MBD3 | O95983 | GOLGA2 | Homo sapiens | Q08379 | 25416956 | |
|
Intra
|
MBD3 | O95983 | KDM1A | Homo sapiens | O60341 | 23455924 | |
|
Intra
|
MBD3 | O95983 | KLF4 | Homo sapiens | O43474 | 24048479 | |
|
Intra
|
MBD3 | O95983 | SDCBP | Homo sapiens | O00560 | 25416956 | |
|
Intra
|
MBD3 | O95983 | KRT15 | Homo sapiens | P19012 | 25416956 | |
|
Intra
|
MBD3 | O95983 | KRT15 | Homo sapiens | P19012 | 25416956 | |
|
Intra
|
MBD3 | O95983 | CEP76 | Homo sapiens | Q8TAP6 | 25416956 | |
|
Intra
|
MBD3 | O95983 | CEP76 | Homo sapiens | Q8TAP6 | 25416956 | |
|
Intra
|
MBD3 | O95983 | CEP76 | Homo sapiens | Q8TAP6 | 25416956 | |
|
Intra
|
MBD3 | O95983 | RCN3 | Homo sapiens | Q96D15 | 25416956 | |
|
Intra
|
MBD3 | O95983 | RCN3 | Homo sapiens | Q96D15 | 25416956 | |
|
Intra
|
MBD3 | O95983 | RCN3 | Homo sapiens | Q96D15 | 25416956 | |
|
Intra
|
MBD3 | O95983 | GATAD2B | Homo sapiens | Q8WXI9 | 25416956 | |
|
Intra
|
MBD3 | O95983 | GATAD2B | Homo sapiens | Q8WXI9 | 25123934 | |
|
Intra
|
MBD3 | O95983 | GATAD2B | Homo sapiens | Q8WXI9 | 25416956 |
MBD3 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P81950 | MBD3 Antibody (YA1695) | WB, ICC/IF, FC, IP | Human, Mouse, Rat |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Hutchinson-Gilford Progeria Syndrome |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Bos taurus | MBD3 | VGNC | VGNC:31274 |
| Canis familiaris | MBD3 | VGNC | VGNC:43050 |
| Macaca mulatta | MBD3 | VGNC | VGNC:81470 |
| Rattus norvegicus | MBD3 | RGD | RGD:1307389 |
| Felis catus | MBD3 | VGNC | VGNC:68199 |
| Mus musculus | MBD3 | MGD | MGI:1333812 |
| Others | MBD3 | NCBI |