IHMT-EZH2-426
IHMT-EZH2-426 is an orally active and selective EZH2 degrader. IHMT-EZH2-426 forms a covalent bond with Cys663 of EZH2, inhibits its catalytic activity, and reduces the protein levels of EZH2 as well as the level of H3K27me3. IHMT-EZH2-426 acts as an antiproliferative agent against B-cell lymphoma and triple-negative breast cancer cells, and also exhibits anti-tumor related activity in Pfeiffer and MDA‑MB‑231 xenograft models. IHMT-EZH2-426 can be used in studies related to B-cell lymphoma and triple-negative breast cancer.
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- CAS No.: 3018914-66-1
- 화학식: C31H35FN4O4S
- 분자량:578.70
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보관:
Please store the product under the recommended conditions in the Certificate of Analysis.
All Histone Methyltransferase Isoforms
More
Biological Activity
제품 설명
IC50 & Target
[1]|
EZH2 WT 1.3 nM (IC50) |
Cellular Effect
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Cell Line
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Type | Value | Description | References |
|---|---|---|---|---|
| Pfeiffer | GI50 |
0.02 μM
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Antiproliferative activity against EZH2-mutant (A677G) human Pfeiffer B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
Antiproliferative activity against EZH2-mutant (A677G) human Pfeiffer B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
|
37826933 |
| KARPAS-422 | GI50 |
0.085 μM
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Antiproliferative activity against EZH2-mutant (Y641N) human Karpas-422 B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
Antiproliferative activity against EZH2-mutant (Y641N) human Karpas-422 B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
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37826933 |
| SU-DHL-4 | GI50 |
1.42 μM
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Antiproliferative activity against EZH2-mutant (Y641S) human SU-DHL-4 B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
Antiproliferative activity against EZH2-mutant (Y641S) human SU-DHL-4 B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
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37826933 |
| SU-DHL-6 | GI50 |
1.95 μM
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Antiproliferative activity against EZH2-mutant (Y641N) human SU-DHL-6 B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
Antiproliferative activity against EZH2-mutant (Y641N) human SU-DHL-6 B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
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37826933 |
| WSUDLCL2 | GI50 |
3.85 μM
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Antiproliferative activity against EZH2-mutant (Y641F) human WSU-DLCL2 B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
Antiproliferative activity against EZH2-mutant (Y641F) human WSU-DLCL2 B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
|
37826933 |
| Daudi | GI50 |
7.01 μM
|
Antiproliferative activity against EZH2 WT human Daudi B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
Antiproliferative activity against EZH2 WT human Daudi B-cell lymphoma cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
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37826933 |
| MDA-MB-231 | GI50 |
6.78 μM
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Antiproliferative activity against human MDA-MB-231 TNBC cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
Antiproliferative activity against human MDA-MB-231 TNBC cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
|
37826933 |
| MDA-MB-468 | GI50 |
1.93 μM
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Antiproliferative activity against human MDA-MB-468 TNBC cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
Antiproliferative activity against human MDA-MB-468 TNBC cells assessed as reduction in cell viability incubated for 5 days by CellTiter-Glo assay.
|
37826933 |
In Vitro
IHMT-EZH2-426 (compound 38) potently inhibits EZH2 WT and various EZH2Y641 mutants, with IC50 values ranging from 1.3 nM to 11 nM; in the AlphaLISA enzyme inhibition assay, it shows 113-fold higher selectivity for EZH2 WT than for EZH1 WT[1].
IHMT-EZH2-426 (0.03-10 μM; 72 h) inhibits H3K27 trimethylation at a concentration of 0.03 μM and reduces EZH2 protein levels at 1 μM after 72 h of treatment in Karpas-422, Pfeiffer, MDA-MB-231 and MDA-MB-468 cell lines[1].
IHMT-EZH2-426 (10 μg/mL; 72 h treatment, up to 48 h washout) achieves sustained inhibition of H3K27me3 for at least 48 h after washout in MDA-MB-231 cells, confirming its persistent binding to the target[1].
IHMT-EZH2-426 (1-50 μM; 4 h compound treatment, 4 h probe incubation) binds to EZH2 in MDA-MB-231 cell lysates, and labels approximately 50% of available target proteins at a concentration of 1 μM[1].
IHMT-EZH2-426 forms a covalent adduct with purified EZH2 (SET domain) protein, confirming its covalent binding mechanism[1].
IHMT-EZH2-426 (0.1-10 μM; 5 days) potently inhibits the proliferation of EZH2-mutant B-cell lymphoma cell lines (GI50 0.02-3.85 μM), and exhibits moderate antiproliferative activity against EZH2-wild-type B-cell lymphoma cell lines as well as triple-negative breast cancer (TNBC) cells (GI50 1.93-7.01 μM)[1].
IHMT-EZH2-426 (for 14 days) inhibits colony formation of MDA-MB-231 and MDA-MB-468 triple-negative breast cancer (TNBC) cells in a dose-dependent manner[1].
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only. Further protocols information, click here.
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Cell Line:B-cell lymphoma cell lines (Karpas-422, Pfeiffer), TNBC cell lines (MDA-MB-231, MDA-MB-468)
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Concentration:0.03, 0.1, 0.3, 1, 3, 10 μM
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Incubation Time:72 h
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Result:Potently inhibited H3K27 trimethylation at 0.03 μM in Karpas-422, Pfeiffer, MDA-MB-231, and MDA-MB-468 cell lines.
Reduced EZH2 protein levels at 1 μM in Karpas-422, Pfeiffer, MDA-MB-231, and MDA-MB-468 cell lines.
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Cell Line:MDA-MB-231 TNBC cells
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Concentration:10 μg/mL
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Incubation Time:72 h (treatment)
0, 2, 4, 6, 8, 12, 24, 48 h (washout) -
Result:Sustained inhibition of H3K27me3 for up to 48 h after washout.
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Cell Line:Pfeiffer, Karpas‑422, SU‑DHL‑4, SU‑DHL‑6, WSU‑DHL2, Daudi, Farage, Raji
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Concentration:0.1, 0.3, 1, 3, 10 μM
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Incubation Time:5 days
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Result:Inhibited proliferation of EZH2-mutant B-cell lymphoma cell lines (GI50 0.02-3.85 μM)
Exhibited moderate antiproliferative activity against EZH2 WT B-cell lymphoma cell lines and TNBC cells, including 3D patient-derived TNBC cells (GI50 1.93-7.01 μM).
Parmacokinetics
In Vivo
IHMT-EZH2-426 (100 mg/kg; p.o.; daily; 20 days) exhibits potent in vivo anti-tumor activity against Pfeiffer diffuse large B-cell lymphoma (DLBCL) xenografts[1].
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.
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Animal Model:BALB/c nude mice (female, 5-week old, 5 × 106 MDA-MB-231 cells)[1]
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Dosage:100 mg/kg
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Administration:p.o.; daily; 14 days
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Result:Suppressed H3K27 trimethylation in tumor tissues.
Reduced EZH2 levels in tumor tissues.
Showed no apparent body weight loss during treatment.
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Animal Model:NCG mice (female, 5-week old, 1 × 107 Pfeiffer cells)[1]
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Dosage:100 mg/kg
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Administration:p.o.; daily; 20 days
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Result:Demonstrated potent antitumor activity with efficacy comparable to the reference compound.
Showed no apparent body weight loss during treatment.
Chemical Information
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CAS No. 3018914-66-1
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분자량 578.70
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화학식 C31H35FN4O4S
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SMILES
O=C(C1=CC(C(C=CC(F)=C2)=C2NC(C=C)=O)=CC(N(C3CCOCC3)C)=C1C)NCC4=C(SC)C=C(C)NC4=O
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선적
Room temperature in continental US; may vary elsewhere.
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보관
Please store the product under the recommended conditions in the Certificate of Analysis.
Protocol
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Patient-Derived Xenograft (PDX)
Patient-derived xenograft (PDX) models are generated by engrafting primary human tumor tissue directly into immunodeficient mice, allowing in vivo propagation of patient tumor biology without initial in vitro adaptation. These models are used to preserve key histopathological and molecular characteristics of the original tumor and enable assessment of tumor growth dynamics and therapeutic response in a living organism. The biological readout is tumor engraftment and subsequent growth in the murine host, which reflects the ability of human tumor cells to survive, vascularize, and expand in an immunocompromised microenvironment.
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Splenic/Portal-Vein Liver Metastasis Xenograft
Splenic and portal-vein liver metastasis xenograft models deliver tumor cells into the portal circulation so that cells reach the liver first and form hepatic metastatic lesions; splenic injection uses the spleen as an access route to the portal system, while direct portal-vein injection introduces cells into the portal vein without requiring splenectomy. The assay detects liver colonization, intrahepatic tumor growth, tumor distribution, treatment response, survival, and liver-metastasis microenvironment changes; readouts include bioluminescence or fluorescence imaging, gross liver nodule counts, liver weight or tumor burden, histology, and survival.
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Subcutaneous Cell-Line-Derived Xenograft
Subcutaneous cell-line-derived xenograft (CDX) models are established by implanting cultured human cancer cell lines into immunodeficient mice, where the injected cells form localized tumors that can be monitored in vivo as a measure of tumorigenic potential, growth kinetics, and treatment response. These models are widely used in oncology research because they allow reproducible tumor formation and enable comparative assessment of tumor growth between different cell lines or genetic manipulations in a controlled in vivo microenvironment. Subcutaneous implantation of cancer cells in immunodeficient mice is a standard approach for evaluating tumor growth behavior and therapeutic response across multiple cancer types, including prostate, esophageal, pancreatic, and colon cancer models.
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Breast Cancer Modeling
Breast cancer is a heterogeneous cancer, and it has been distinguished into four subtypes: luminal A, luminal B, HER2-positive and basal-like. Molecular mutations, epigenetic alterations, hormone exposure and immune microenvironment are related to the progression of breast cancer.
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Orthotopic Cell-Line Xenograft
Orthotopic cell-line xenograft models involve implantation of human cancer cell lines into the anatomically corresponding organ of immunodeficient mice to reproduce tumor growth within a native microenvironment, enabling more clinically relevant tumor behavior compared with subcutaneous models. These models are widely used because orthotopic placement better recapitulates tumor progression, including invasion and metastatic spread, which are often underrepresented in heterotopic implantation systems. Compared with conventional xenografts, orthotopic implantation is described as more technically complex but provides improved simulation of tumor-microenvironment interactions and metastatic behavior, making it particularly valuable for translational oncology research. Surgical orthotopic implantation approaches have been emphasized as enabling faithful reproduction of clinical cancer features, including metastasis and disease progression patterns that align with the tumor’s organ of origi
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Cell Viability Determination by MTT Colorimetric Assay
The following protocol uses the MTT colorimetric assay as a classic literature-established method for assessing cell viability/metabolic activity in cultured mammalian cells. MTT[3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide] is reduced by metabolically active cells to a colored formazan product; the amount of formazan is quantified spectrophotometrically and provides an indirect measure of metabolically active viable cells. Importantly, MTT reduction reflects cellular oxidoreductase/metabolic activity rather than an absolute direct count of living cells, so changes in cellular metabolism can alter the signal independently of cell number.
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Intraperitoneal/Peritoneal Dissemination Xenograft
Intraperitoneal (IP) or peritoneal dissemination xenograft models are based on the introduction of human cancer cells into the peritoneal cavity of immunodeficient mice, where they attach to peritoneal surfaces, form multicellular aggregates or spheroids, and progressively generate disseminated tumor nodules that mimic advanced peritoneal metastatic disease. These models are widely used to study ovarian cancer progression, tumor-microenvironment interactions, and intraperitoneal therapeutic responses, often incorporating bioluminescence or fluorescence imaging to longitudinally monitor tumor burden in vivo. The biological principle relies on the capacity of tumor cells such as SKOV3 or related ovarian carcinoma lines to survive in suspension, aggregate within ascites-like fluid, adhere to mesothelial surfaces, and invade peritoneal organs, thereby recapitulating human peritoneal carcinomatosis patterns observed in advanced disease.
순도&문서
References
Calculators
Concentration (start) × Volume (start) = Concentration (final) × Volume (final)