TAF6L - TATA-box binding protein associated factor 6 like Gene
Also Known as PAF65A
Species: Homo sapiens
About TAF6L
This gene has 8 transcripts (splice variants), 187 orthologues and 1 paralogue. Ubiquitous expression in kidney (RPKM 7.9), fat (RPKM 5.1) and 25 other tissues.
Summary
Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes a protein that is a component of the PCAF histone acetylase complex and structurally similar to one of the histone-like TAFs, TAF6. The PCAF histone acetylase complex, which is composed of more than 20 polypeptides some of which are TAFs, is required for myogenic transcription and differentiation. [provided by RefSeq, Jul 2008]
TAF6L Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_006473.4 | NP_006464.1 | TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
9674425 | GOA |
| enables transcription coactivator activity |
IDA
IDA: Inferred from direct assay
|
11564863 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of SAGA complex |
IDA
IDA: Inferred from direct assay
|
11564863 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
11564863 | GOA |
TAF6L Protein Structure
TAF: TATA box binding protein associated factor (TAF) (10 - 73)
TAF6_C: TAF6 C-terminal HEAT repeat domain (242 - 333)
- 0
- 100
- 200
- 300
- 400
- 500
- 622 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L |
|
TAF6L Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
TAF6L | Q9Y6J9 | PFDN5 | Homo sapiens | Q99471 | 32296183 | |
|
Intra
|
TAF6L | Q9Y6J9 | PFDN5 | Homo sapiens | Q99471 | 32296183 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9 | Homo sapiens | Q16594 | 16713569 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9 | Homo sapiens | Q16594 | 25416956 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9 | Homo sapiens | Q16594 | 32296183 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9 | Homo sapiens | Q16594 | 32296183 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9 | Homo sapiens | Q16594 | 25416956 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9 | Homo sapiens | Q16594 | 9674425 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9 | Homo sapiens | Q16594 | 33961781 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9B | Homo sapiens | Q9HBM6 | 28514442 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9B | Homo sapiens | Q9HBM6 | 32296183 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9B | Homo sapiens | Q9HBM6 | 33961781 | |
|
Intra
|
TAF6L | Q9Y6J9 | TAF9B | Homo sapiens | Q9HBM6 | 32296183 |
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Felis catus | TAF6L | VGNC | VGNC:65936 |
| Bos taurus | TAF6L | VGNC | VGNC:35578 |
| Canis familiaris | TAF6L | VGNC | VGNC:47086 |
| Mus musculus | TAF6L | MGD | MGI:2444957 |
| Macaca mulatta | TAF6L | VGNC | VGNC:78149 |
| Rattus norvegicus | TAF6L | RGD | RGD:1310123 |
| Others | TAF6L | NCBI |