ATP6V0D1 - ATPase H+ transporting V0 subunit d1 Gene
Also Known as P39; VATX; VMA6; ATP6D; ATP6DV; VPATPD
Species: Homo sapiens
About ATP6V0D1
This gene has 17 transcripts (splice variants), 210 orthologues and 1 paralogue. Ubiquitous expression in brain (RPKM 53.8), thyroid (RPKM 41.0) and 25 other tissues.
Summary
This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c'', and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This encoded protein is known as the D subunit and is found ubiquitously. [provided by RefSeq, Jul 2008]
ATP6V0D1 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_004691.5 | NP_004682.2 | V-type proton ATPase subunit d 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
16713569 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in cellular response to increased oxygen levels |
IMP
IMP: Inferred from mutant phenotype
|
28296633 | GOA |
| involved in intracellular iron ion homeostasis |
IMP
IMP: Inferred from mutant phenotype
|
28296633 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| colocalizes with centrosome |
IDA
IDA: Inferred from direct assay
|
21844891 | GOA |
| located in membrane |
IDA
IDA: Inferred from direct assay
|
18752060 | GOA |
| part of vacuolar proton-transporting V-type ATPase complex |
IDA
IDA: Inferred from direct assay
|
18752060 | GOA |
ATP6V0D1 Protein Structure
vATP-synt_AC39: ATP synthase (C/AC39) subunit (15 - 348)
- 0
- 100
- 200
- 300
- 351 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
V-type proton ATPase subunit d 1 |
|
ATP6V0D1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
ATP6V0D1 | P61421 | ATXN1 | Homo sapiens | P54253 | 16713569 | |
|
Intra
|
ATP6V0D1 | P61421 | DMRT3 | Homo sapiens | Q9NQL9 | 32296183 |
ATP6V0D1 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P82463 | ATP6V0D1 Antibody (YA2208) | WB, IHC-F, IHC-P, ICC/IF, FC, IP | Human, Mouse, Rat |
| HY-P82463A | ATP6V0D1 Antibody (YA2208)(PBS only) | WB, IHC-F, IHC-P, ICC/IF, FC, IP | Human, Mouse, Rat |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Distal Renal Tubular Acidosis |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | ATP6V0D1 | MGD | MGI:1201778 |
| Bos taurus | ATP6V0D1 | VGNC | VGNC:26312 |
| Rattus norvegicus | ATP6V0D1 | RGD | RGD:1306159 |
| Canis familiaris | ATP6V0D1 | VGNC | VGNC:38273 |
| Felis catus | ATP6V0D1 | VGNC | VGNC:60022 |
| Macaca mulatta | ATP6V0D1 | VGNC | VGNC:99485 |
| Others | ATP6V0D1 | NCBI |