XRCC6 - X-ray repair cross complementing 6 Gene
Also Known as ML8; KU70; TLAA; CTC75; CTCBF; G22P1
Species: Homo sapiens
About XRCC6
This gene has 8 transcripts (splice variants), 218 orthologues and 1 paralogue. Ubiquitous expression in testis (RPKM 152.7), lymph node (RPKM 92.6) and 25 other tissues.
Summary
The p70/p80 autoantigen is a nuclear complex consisting of two subunits with molecular masses of approximately 70 and 80 kDa. The complex functions as a single-stranded DNA-dependent ATP-dependent helicase. The complex may be involved in the repair of nonhomologous DNA ends such as that required for double-strand break repair, transposition, and V(D)J recombination. High levels of autoantibodies to p70 and p80 have been found in some patients with systemic lupus erythematosus. [provided by RefSeq, Jul 2008]
XRCC6 Products (4)
| mRNA | Protein | Name |
|---|---|---|
| NM_001288976.2 | NP_001275905.1 | X-ray repair cross-complementing protein 6 isoform 1 |
| NM_001288977.2 | NP_001275906.1 | X-ray repair cross-complementing protein 6 isoform 2 |
| NM_001288978.2 | NP_001275907.1 | X-ray repair cross-complementing protein 6 isoform 3 |
| NM_001469.5 | NP_001460.1 | X-ray repair cross-complementing protein 6 isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables 5'-deoxyribose-5-phosphate lyase activity |
IMP
IMP: Inferred from mutant phenotype
|
20383123 | GOA |
| enables ATP hydrolysis activity |
IDA
IDA: Inferred from direct assay
|
9368068 | GOA |
| enables ATP-dependent activity, acting on DNA |
IDA
IDA: Inferred from direct assay
|
9368068 | GOA |
| contributes to DNA end binding |
IDA
IDA: Inferred from direct assay
|
9368068 | GOA |
| enables DNA helicase activity |
IDA
IDA: Inferred from direct assay
|
9368068 | GOA |
| enables cyclin binding |
IPI
IPI: Inferred from physical interaction
|
15159402 | GOA |
| contributes to double-stranded telomeric DNA binding |
IDA
IDA: Inferred from direct assay
|
10409678 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
8621488 | GOA |
| enables protein-containing complex binding |
IPI
IPI: Inferred from physical interaction
|
12377759 | GOA |
| enables scaffold protein binding |
IPI
IPI: Inferred from physical interaction
|
23555801 | GOA |
| enables transcription cis-regulatory region binding |
IDA
IDA: Inferred from direct assay
|
18809223 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of DNA-dependent protein kinase complex |
IPI
IPI: Inferred from physical interaction
|
28840859 | GOA |
| part of DNA-dependent protein kinase-DNA ligase 4 complex |
IDA
IDA: Inferred from direct assay
|
34352203 | GOA |
| part of Ku70:Ku80 complex |
IDA
IDA: Inferred from direct assay
|
20383123 | GOA |
| part of Ku70:Ku80 complex |
IPI
IPI: Inferred from physical interaction
|
11493912 | GOA |
| part of nonhomologous end joining complex |
IDA
IDA: Inferred from direct assay
|
20383123 | GOA |
| located in nucleolus |
IDA
IDA: Inferred from direct assay
|
27829214 | GOA |
| part of protein-DNA complex |
IDA
IDA: Inferred from direct assay
|
22504299 | GOA |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
22504299 | GOA |
| part of transcription regulator complex |
IDA
IDA: Inferred from direct assay
|
12145306 | GOA |
XRCC6 Protein Structure
Ku_N: Ku70/Ku80 N-terminal alpha/beta domain (37 - 255)
Ku: Ku70/Ku80 beta-barrel domain (261 - 458)
Ku_C: Ku70/Ku80 C-terminal arm (469 - 559)
SAP: SAP domain (573 - 607)
- 0
- 100
- 200
- 300
- 400
- 500
- 609 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
X-ray repair cross-complementing protein 6 |
|
XRCC6 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
XRCC6 | P12956 | TPT1 | Homo sapiens | P13693 | 22451927 | |
|
Intra
|
XRCC6 | P12956 | SIRT1 | Homo sapiens | Q96EB6 | 15205477 | |
|
Intra
|
XRCC6 | P12956 | SIRT1 | Homo sapiens | Q96EB6 | 17334224 | |
|
Intra
|
XRCC6 | P12956 | HMBOX1 | Homo sapiens | Q6NT76 | 23685356 | |
|
Intra
|
XRCC6 | P12956 | PRKDC | Homo sapiens | P78527 | 26496610 | |
|
Intra
|
XRCC6 | P12956 | PRKDC | Homo sapiens | P78527 | 17308091 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 17159921 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 17283121 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 11493912 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 17308091 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 26496610 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 33961781 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 22451927 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 25574025 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 28514442 | |
|
Intra
|
XRCC6 | P12956 | XRCC5 | Homo sapiens | P13010 | 32296183 | |
|
Intra
|
XRCC6 | P12956 | TP53 | Homo sapiens | P04637 | 15782130 | |
|
Intra
|
XRCC6 | P12956 | WRN | Homo sapiens | Q14191 | 14734561 | |
|
Intra
|
XRCC6 | P12956 | WRN | Homo sapiens | Q14191 | 33961781 | |
|
Intra
|
XRCC6 | P12956 | WRN | Homo sapiens | Q14191 | 26496610 | |
|
Intra
|
XRCC6 | P12956 | WRN | Homo sapiens | Q14191 | 28514442 | |
|
Intra
|
XRCC6 | P12956 | RNF11 | Homo sapiens | Q9Y3C5 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | RNF11 | Homo sapiens | Q9Y3C5 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | RNF11 | Homo sapiens | Q9Y3C5 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | HTT | Homo sapiens | P42858 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | HTT | Homo sapiens | P42858 | 15383276 | |
|
Intra
|
XRCC6 | P12956 | HTT | Homo sapiens | P42858 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | HTT | Homo sapiens | P42858 | 15383276 | |
|
Intra
|
XRCC6 | P12956 | HTT | Homo sapiens | P42858 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | BAX | Homo sapiens | Q07812 | 15205477 | |
|
Intra
|
XRCC6 | P12956 | ARAP1 | Homo sapiens | Q96P48 | 16169070 | |
|
Intra
|
XRCC6 | P12956 | PPID | Homo sapiens | Q08752 | 21146485 | |
|
Intra
|
XRCC6 | P12956 | XRCC4 | Homo sapiens | Q13426 | 17124166 | |
|
Intra
|
XRCC6 | P12956 | XRCC4 | Homo sapiens | Q13426 | 17124166 | |
|
Intra
|
XRCC6 | P12956 | XRCC4 | Homo sapiens | Q13426 | 26496610 | |
|
Intra
|
XRCC6 | P12956 | DEAF1 | Homo sapiens | O75398 | 22442688 | |
|
Intra
|
XRCC6 | P12956 | WFS1 | Homo sapiens | O76024 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | WFS1 | Homo sapiens | O76024 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | WFS1 | Homo sapiens | O76024 | 32814053 | |
|
Intra
|
XRCC6 | P12956 | TERF2IP | Homo sapiens | Q9NYB0 | 26496610 | |
|
Intra
|
XRCC6 | P12956 | TCF7L2 | Homo sapiens | Q9NQB0 | 17283121 | |
|
Intra
|
XRCC6 | P12956 | TCF7L2 | Homo sapiens | Q9NQB0 | 17283121 | |
|
Intra
|
XRCC6 | P12956 | COIL | Homo sapiens | P38432 | 21070772 | |
|
Intra
|
XRCC6 | P12956 | COIL | Homo sapiens | P38432 | 21070772 |
Recombinant XRCC6 Proteins
| Cat. No. | Product Name | Accession | Purity |
|---|---|---|---|
| HY-P73846 | Ku70-Ku80 Heterodimer Protein, Human (sf9, His) | P13010 (M1-I732)&P12956 (M1-D609) | ≥ 90%, as determined by reducing SDS-PAGE. |
XRCC6 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P80202 | Ku70 Antibody (YA715) | WB, IHC-P | Human, Mouse |
| HY-P80736 | Ku70 Antibody (YA319) | WB, IHC-F, IHC-P, ICC/IF | Human |
| HY-P80736A | Ku70 Antibody (YA319)(PBS only) | WB, IHC-F, IHC-P, ICC/IF | Human |
| HY-P85597 | Ku70 Antibody (YA5289) | WB, ICC/IF, IP | Human, Monkey |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Lupus Erythematosus |
|
|
| Nijmegen Breakage Syndrome |
|
|
| Werner Syndrome |
|
|
| Systemic Lupus Erythematosus |
|
|
| Combined Immunodeficiency |
|
|
| Lig4 Syndrome |
|
|
| Epidemic Typhus |
|
|
| Severe Combined Immunodeficiency With Sensitivity To Ionizing Radiation |
|
|
| Severe Combined Immunodeficiency |
|
|
| Brill-Zinsser Disease |
|
|
| Colorectal Cancer |
|
|
| Xeroderma Pigmentosum, Complementation Group A |
|
|
| Endemic Typhus |
|
|
| Xeroderma Pigmentosum, Variant Type |
|
|
| Autosomal Recessive Cerebellar Ataxia |
|
|
| Epilepsy, Idiopathic Generalized 2 |
|
|
| Lung Cancer |
|
|
| Retinitis Pigmentosa 44 |
|
|
| Prostate Cancer |
|
|
| Microcephaly |
|
|
| Trichothiodystrophy |
|
|
| Breast Cancer |
|
|
| Seckel Syndrome |
|
|
| Cerebellar Disease |
|
|
| Hereditary Breast Ovarian Cancer Syndrome |
|
|
| Aplastic Anemia |
|
|
| Fanconi Anemia, Complementation Group A |
|
|
| Dyskeratosis Congenita |
|
|
| Congenital Nervous System Abnormality |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Canis familiaris | XRCC6 | VGNC | VGNC:48470 |
| Rattus norvegicus | XRCC6 | RGD | RGD:2643 |
| Macaca mulatta | XRCC6 | VGNC | VGNC:98471 |
| Felis catus | XRCC6 | VGNC | VGNC:67121 |
| Bos taurus | XRCC6 | VGNC | VGNC:37007 |
| Mus musculus | XRCC6 | MGD | MGI:95606 |
| Others | XRCC6 | NCBI |