ILF3 - interleukin enhancer binding factor 3 Gene
Also Known as CBTF; DRBF; MMP4; MPP4; NF90; NFAR; NF110; NF90a; NF90b; NF90c; NFAR2; TCP80; DRBP76; NF110b; NFAR-1; NFAR-2; NFAR90; TCP110; MPP4110; NF90ctv; NFAR110; MPHOSPH4; NF-AT-90
Species: Homo sapiens
About ILF3
This gene has 23 transcripts (splice variants), 220 orthologues and 14 paralogues. Ubiquitous expression in bone marrow (RPKM 45.0), testis (RPKM 34.6) and 25 other tissues.
Summary
This gene encodes a double-stranded RNA (dsRNA) binding protein that complexes with Other proteins, dsRNAs, small noncoding RNAs, and mRNAs to regulate gene expression and stabilize mRNAs. This protein (NF90, ILF3) forms a heterodimer with a 45 kDa transcription factor (NF45, ILF2) required for T-cell expression of interleukin 2. This complex has been shown to affect the redistribution of nuclear mRNA to the cytoplasm. Knockdown of NF45 or NF90 protein retards cell growth, possibly by inhibition of mRNA stabilization. In contrast, an isoform (NF110) of this gene that is predominantly restricted to the nucleus has only minor effects on cell growth when its levels are reduced. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, Dec 2014]
ILF3 Products (24)
| mRNA | Protein | Name |
|---|---|---|
| NM_001137673.2 | NP_001131145.1 | interleukin enhancer-binding factor 3 isoform e |
| NM_001394808.1 | NP_001381737.1 | interleukin enhancer-binding factor 3 isoform d |
| NM_001394809.1 | NP_001381738.1 | interleukin enhancer-binding factor 3 isoform d |
| NM_001394810.1 | NP_001381739.1 | interleukin enhancer-binding factor 3 isoform d |
| NM_001394811.1 | NP_001381740.1 | interleukin enhancer-binding factor 3 isoform a |
| NM_001394812.1 | NP_001381741.1 | interleukin enhancer-binding factor 3 isoform a |
| NM_001394813.1 | NP_001381742.1 | interleukin enhancer-binding factor 3 isoform f |
| NM_001394814.1 | NP_001381743.1 | interleukin enhancer-binding factor 3 isoform g |
| NM_001394815.1 | NP_001381744.1 | interleukin enhancer-binding factor 3 isoform h |
| NM_001394816.1 | NP_001381745.1 | interleukin enhancer-binding factor 3 isoform h |
| NM_001394817.1 | NP_001381746.1 | interleukin enhancer-binding factor 3 isoform i |
| NM_001394818.1 | NP_001381747.1 | interleukin enhancer-binding factor 3 isoform j |
| NM_001394819.1 | NP_001381748.1 | interleukin enhancer-binding factor 3 isoform k |
| NM_001394820.1 | NP_001381749.1 | interleukin enhancer-binding factor 3 isoform k |
| NM_001394821.1 | NP_001381750.1 | interleukin enhancer-binding factor 3 isoform e |
| NM_001394822.1 | NP_001381751.1 | interleukin enhancer-binding factor 3 isoform e |
| NM_001394823.1 | NP_001381752.1 | interleukin enhancer-binding factor 3 isoform e |
| NM_001394824.1 | NP_001381753.1 | interleukin enhancer-binding factor 3 isoform b |
| NM_001394826.1 | NP_001381755.1 | interleukin enhancer-binding factor 3 isoform b |
| NM_001394827.1 | NP_001381756.1 | interleukin enhancer-binding factor 3 isoform l |
| NM_004516.4 | NP_004507.2 | interleukin enhancer-binding factor 3 isoform b |
| NM_012218.4 | NP_036350.2 | interleukin enhancer-binding factor 3 isoform a |
| NM_017620.3 | NP_060090.2 | interleukin enhancer-binding factor 3 isoform d |
| NM_153464.3 | NP_703194.1 | interleukin enhancer-binding factor 3 isoform c |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables DNA binding |
IDA
IDA: Inferred from direct assay
|
7519613 | GOA |
| enables double-stranded RNA binding |
IDA
IDA: Inferred from direct assay
|
10574923 | GOA |
| enables mRNA 3'-UTR AU-rich region binding |
IDA
IDA: Inferred from direct assay
|
14731398 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
9442054 | GOA |
| enables virus receptor activity |
IDA
IDA: Inferred from direct assay
|
21123651 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in negative regulation of DNA-templated transcription |
IDA
IDA: Inferred from direct assay
|
11739746 | GOA |
| involved in positive regulation of DNA-templated transcription |
IDA
IDA: Inferred from direct assay
|
11739746 | GOA |
| involved in protein phosphorylation |
IDA
IDA: Inferred from direct assay
|
21123651 | GOA |
| involved in spliceosome-depend formation of circular RNA |
IDA
IDA: Inferred from direct assay
|
28625552 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
21123651 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
8885239 | GOA |
| part of ribonucleoprotein complex |
IDA
IDA: Inferred from direct assay
|
17289661 | GOA |
ILF3 Protein Structure
DZF: DZF domain (94 - 342)
dsrm: Double-stranded RNA binding motif (403 - 464)
dsrm: Double-stranded RNA binding motif (529 - 588)
- 0
- 200
- 400
- 600
- 800
- 894 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
interleukin enhancer-binding factor 3 |
|
ILF3 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Cross
|
ILF3 | Q12906 | M | Vesicular stomatitis New Jersey virus | P08325 | 18337511 | |
|
Intra
|
ILF3 | Q12906 | HNRNPA2B1 | Homo sapiens | P22626 | 35271311 | |
|
Intra
|
ILF3 | Q12906 | HNRNPA2B1 | Homo sapiens | P22626 | 23976881 | |
|
Intra
|
ILF3 | Q12906 | PRMT1 | Homo sapiens | Q99873 | 10749851 | |
|
Intra
|
ILF3 | Q12906 | PRMT1 | Homo sapiens | Q99873 | 35271311 | |
|
Cross
|
ILF3 | Q12906 | NS | Influenza A virus | P03496 | 23853584 |
ILF3 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P82159 | ILF3 Antibody (YA1904) | WB, IHC-P, ICC/IF, IP, FC | Human, Mouse |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Childhood Endodermal Sinus Tumor |
|
|
| Treacher Collins Syndrome 1 |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Felis catus | ILF3 | VGNC | VGNC:67791 |
| Macaca mulatta | ILF3 | VGNC | VGNC:73737 |
| Rattus norvegicus | ILF3 | RGD | RGD:619734 |
| Canis familiaris | ILF3 | VGNC | VGNC:42000 |
| Bos taurus | ILF3 | VGNC | VGNC:30176 |
| Mus musculus | ILF3 | MGD | MGI:1339973 |
| Others | ILF3 | NCBI |