XRCC1 - X-ray repair cross complementing 1 Gene
Also Known as RCC; SCAR26
Species: Homo sapiens
About XRCC1
This gene has 9 transcripts (splice variants), 189 orthologues, 1 paralogue and is associated with 1 phenotype. Ubiquitous expression in ovary (RPKM 16.0), testis (RPKM 12.7) and 25 other tissues.
Summary
The protein encoded by this gene is involved in the efficient repair of DNA single-strand breaks formed by exposure to ionizing radiation and alkylating agents. This protein interacts with DNA Ligase III, polymerase beta and poly (ADP-ribose) polymerase to participate in the base excision repair pathway. It may play a role in DNA processing during meiogenesis and recombination in germ cells. A rare microsatellite polymorphism in this gene is associated with Cancer in patients of varying radiosensitivity. [provided by RefSeq, Jul 2008]
XRCC1 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_006297.3 | NP_006288.2 | DNA repair protein XRCC1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables ADP-D-ribose modification-dependent protein binding |
IDA
IDA: Inferred from direct assay
|
34102106 | GOA |
| enables enzyme binding |
IPI
IPI: Inferred from physical interaction
|
8532526 | GOA |
| enables oxidized DNA binding |
IMP
IMP: Inferred from mutant phenotype
|
28002403 | GOA |
| enables poly-ADP-D-ribose binding |
IDA
IDA: Inferred from direct assay
|
14500814 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
14755728 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in chromatin |
IDA
IDA: Inferred from direct assay
|
28002403 | GOA |
| located in nucleolus |
IDA
IDA: Inferred from direct assay
|
28002403 | GOA |
| is active in site of DNA damage |
IDA
IDA: Inferred from direct assay
|
14500814 | GOA |
XRCC1 Protein Structure
XRCC1_N: XRCC1 N terminal domain (1 - 151)
BRCT: BRCA1 C Terminus (BRCT) domain (318 - 389)
BRCT: BRCA1 C Terminus (BRCT) domain (540 - 615)
- 0
- 100
- 200
- 300
- 400
- 500
- 600
- 633 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
DNA repair protein XRCC1 |
|
XRCC1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
XRCC1 | P18887 | PNKP | Homo sapiens | Q96T60 | 19155274 | |
|
Intra
|
XRCC1 | P18887 | PNKP | Homo sapiens | Q96T60 | 21637298 | |
|
Intra
|
XRCC1 | P18887 | PNKP | Homo sapiens | Q96T60 | 17353931 | |
|
Intra
|
XRCC1 | P18887 | PNKP | Homo sapiens | Q96T60 | 19155274 | |
|
Intra
|
XRCC1 | P18887 | PNKP | Homo sapiens | Q96T60 | 19155274 | |
|
Intra
|
XRCC1 | P18887 | PNKP | Homo sapiens | Q96T60 | 26496610 | |
|
Intra
|
XRCC1 | P18887 | CHEK2 | Homo sapiens | O96017 | 18971944 | |
|
Intra
|
XRCC1 | P18887 | CHEK2 | Homo sapiens | O96017 | 18971944 | |
|
Intra
|
XRCC1 | P18887 | APLF | Homo sapiens | Q8IW19 | 17353262 | |
|
Intra
|
XRCC1 | P18887 | APLF | Homo sapiens | Q8IW19 | 23178593 | |
|
Intra
|
XRCC1 | P18887 | APLF | Homo sapiens | Q8IW19 | 17353262 | |
|
Intra
|
XRCC1 | P18887 | APLF | Homo sapiens | Q8IW19 | 17353262 | |
|
Intra
|
XRCC1 | P18887 | TDP1 | Homo sapiens | Q9NUW8 | 19851285 | |
|
Intra
|
XRCC1 | P18887 | PARP1 | Homo sapiens | P09874 | 15044383 | |
|
Intra
|
XRCC1 | P18887 | POLB | Homo sapiens | P06746 | 15520167 | |
|
Intra
|
XRCC1 | P18887 | POLB | Homo sapiens | P06746 | 26496610 | |
|
Intra
|
XRCC1 | P18887 | POLI | Homo sapiens | Q9UNA4 | 18923427 | |
|
Intra
|
XRCC1 | P18887 | MAX | Homo sapiens | P61244 | 25609649 | |
|
Intra
|
XRCC1 | P18887 | APTX | Homo sapiens | Q7Z2E3 | 15044383 | |
|
Intra
|
XRCC1 | P18887 | APTX | Homo sapiens | Q7Z2E3 | 15044383 | |
|
Intra
|
XRCC1 | P18887 | APTX | Homo sapiens | Q7Z2E3 | 15555565 | |
|
Intra
|
XRCC1 | P18887 | APTX | Homo sapiens | Q7Z2E3 | 15380105 | |
|
Intra
|
XRCC1 | P18887 | APTX | Homo sapiens | Q7Z2E3 | 15380105 | |
|
Intra
|
XRCC1 | P18887 | APTX | Homo sapiens | Q7Z2E3 | 15367657 | |
|
Intra
|
XRCC1 | P18887 | APTX | Homo sapiens | Q7Z2E3 | 15367657 | |
|
Cross
|
XRCC1 | P18887 | Polb | Rattus norvegicus | P06766 | 20351257 | |
|
Cross
|
XRCC1 | P18887 | Polb | Rattus norvegicus | P06766 | 20351257 | |
|
Cross
|
XRCC1 | P18887 | Polb | Rattus norvegicus | P06766 | 20351257 | |
|
Cross
|
XRCC1 | P18887 | Polb | Rattus norvegicus | P06766 | 25456813 |
XRCC1 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P81314 | XRCC1 Antibody (YA1058) | WB | Human |
| HY-P81314A | XRCC1 Antibody (YA1059) | WB, IHC-P, ICC/IF | Human, Mouse, Rat |
| HY-P84149 | XRCC1 Antibody (YA3846) | WB, IHC-P, FC, ELISA | Human, Monkey |
| HY-P84149A | XRCC1 Antibody (YA3846)(PBS only) | WB, IHC-P, FC, ELISA | Human, Monkey |
| HY-P85605 | XRCC1 Antibody (YA5297) | WB | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Spinocerebellar Ataxia, Autosomal Recessive 26 |
|
|
| Apraxia |
|
|
| Gastric Cardia Carcinoma |
|
|
| Xeroderma Pigmentosum, Variant Type |
|
|
| Fibrosclerosis Of Breast |
|
|
| Oculomotor Apraxia |
|
|
| Xeroderma Pigmentosum, Complementation Group D |
|
|
| Squamous Cell Carcinoma |
|
|
| Mucositis |
|
|
| Ataxia-Telangiectasia |
|
|
| Spinocerebellar Ataxia Type 1 With Axonal Neuropathy |
|
|
| Lung Cancer |
|
|
| Nasopharyngeal Carcinoma |
|
|
| Non-Proliferative Fibrocystic Change Of The Breast |
|
|
| Childhood Acute Lymphocytic Leukemia |
|
|
| Basal Cell Carcinoma |
|
|
| Ataxia, Early-Onset, With Oculomotor Apraxia And Hypoalbuminemia |
|
|
| Bladder Cancer |
|
|
| Xeroderma Pigmentosum, Complementation Group G |
|
|
| Xeroderma Pigmentosum, Complementation Group A |
|
|
| Tobacco Addiction |
|
|
| Colorectal Cancer |
|
|
| Xeroderma Pigmentosum, Complementation Group C |
|
|
| Xeroderma Pigmentosum, Complementation Group F |
|
|
| Breast Cancer |
|
|
| Gastric Cancer |
|
|
| Cardia Cancer |
|
|
| Lig4 Syndrome |
|
|
| Sporadic Breast Cancer |
|
|
| Prostate Cancer |
|
|
| Burkitt Lymphoma |
|
|
| Fanconi Anemia, Complementation Group A |
|
|
| Autosomal Recessive Cerebellar Ataxia |
|
|
| Cataract |
|
|
| Trichothiodystrophy |
|
|
| Pancreatic Cancer |
|
|
| Cockayne Syndrome A |
|
|
| Ovarian Cancer |
|
|
| Lung Cancer Susceptibility 3 |
|
|
| Cerebellar Disease |
|
|
| Seckel Syndrome |
|
|
| Hereditary Breast Ovarian Cancer Syndrome |
|
|
| Lynch Syndrome |
|
|
| Congenital Nervous System Abnormality |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | XRCC1 | RGD | RGD:619823 |
| Canis familiaris | XRCC1 | VGNC | VGNC:54004 |
| Felis catus | XRCC1 | VGNC | VGNC:97689 |
| Bos taurus | XRCC1 | VGNC | VGNC:97328 |
| Macaca mulatta | XRCC1 | VGNC | VGNC:97845 |
| Mus musculus | XRCC1 | MGD | MGI:99137 |
| Others | XRCC1 | NCBI |