SLAIN1 - SLAIN motif family member 1 Gene

Also Known as C13orf32

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 122060

About SLAIN1

Cytogenetic location: 13q22.3 Genomic coordinates (GRCh38): 13:77,697,687-77,764,229 (from NCBI)

This gene has 18 transcripts (splice variants), 267 orthologues and 1 paralogue. Biased expression in brain (RPKM 39.3), testis (RPKM 10.8) and 7 other tissues.

Summary

Predicted to be located in cytoplasm and Cytoskeleton. [provided by Alliance of Genome Resources, Apr 2022]

SLAIN1 Products (11)

mRNA Protein Name
NM_001040153.4 NP_001035243.2 SLAIN motif-containing protein 1 isoform A precursor
NM_001242868.2 NP_001229797.1 SLAIN motif-containing protein 1 isoform C
NM_001242869.2 NP_001229798.1 SLAIN motif-containing protein 1 isoform D
NM_001242870.2 NP_001229799.1 SLAIN motif-containing protein 1 isoform D
NM_001242871.2 NP_001229800.1 SLAIN motif-containing protein 1 isoform E
NM_001366665.1 NP_001353594.1 SLAIN motif-containing protein 1 isoform F precursor
NM_001366666.1 NP_001353595.1 SLAIN motif-containing protein 1 isoform B
NM_001411026.1 NP_001397955.1 SLAIN motif-containing protein 1 isoform G
NM_001412123.1 NP_001399052.1 SLAIN motif-containing protein 1 isoform H
NM_001412125.1 NP_001399054.1 SLAIN motif-containing protein 1 isoform I
NM_144595.4 NP_653196.1 SLAIN motif-containing protein 1 isoform B

Gene Ontology

  • Molecular Function
Molecular Function GO Annotation Evidence References Source
enables protein binding IPI
IPI: Inferred from physical interaction
25416956 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

SLAIN1 Protein Structure

SLAIN

SLAIN: SLAIN motif-containing family (187 - 568)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 568 a.a.
Protein Preferred Names Protein Names

SLAIN motif-containing protein 1

SLAIN1 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method References
Intra
SLAIN1 Q8ND83 RFPL3 Homo sapiens O75679
Y2H Array
32296183
Intra
SLAIN1 Q8ND83 RFPL3 Homo sapiens O75679
Y2H Prey Pooling
32296183
Intra
SLAIN1 Q8ND83 PATZ1 Homo sapiens Q9HBE1-4
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 CARD9 Homo sapiens Q9H257-2
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 LMO3 Homo sapiens Q8TAP4-4
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 PRPF31 Homo sapiens Q8WWY3
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 PSMA3 Homo sapiens P25788
Validated Y2H
25416956
Intra
SLAIN1 Q8ND83 PDLIM7 Homo sapiens Q9NR12
Y2H Array
32296183
Intra
SLAIN1 Q8ND83 PDLIM7 Homo sapiens Q9NR12
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 PDLIM7 Homo sapiens Q9NR12
Y2H Prey Pooling
32296183
Intra
SLAIN1 Q8ND83 PFDN5 Homo sapiens Q99471
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 PFDN5 Homo sapiens Q99471
Y2H Array
32296183
Intra
SLAIN1 Q8ND83 PFDN5 Homo sapiens Q99471
Y2H Prey Pooling
32296183
Intra
SLAIN1 Q8ND83 EXOSC8 Homo sapiens Q96B26
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 EXOSC8 Homo sapiens Q96B26
Y2H Prey Pooling
32296183
Intra
SLAIN1 Q8ND83 EXOSC8 Homo sapiens Q96B26
Y2H Array
32296183
Intra
SLAIN1 Q8ND83 TSSK3 Homo sapiens Q96PN8
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 NXF1 Homo sapiens Q9UBU9
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 GOLGA1 Homo sapiens Q92805
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 CRACR2A Homo sapiens Q9BSW2
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 FHL3 Homo sapiens Q13643
Y2H Prey Pooling
25416956
Intra
SLAIN1 Q8ND83 FHL3 Homo sapiens Q13643
Y2H Prey Pooling
32296183
Intra
SLAIN1 Q8ND83 FHL3 Homo sapiens Q13643
Y2H Array
25416956
Intra
SLAIN1 Q8ND83 FHL3 Homo sapiens Q13643
Y2H Array
32296183
Intra
SLAIN1 Q8ND83 NTAQ1 Homo sapiens Q96HA8
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 ARMC7 Homo sapiens Q9H6L4
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 HOMER3 Homo sapiens Q9NSC5
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 KIF9 Homo sapiens Q9HAQ2
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 AIRIM Homo sapiens Q9NX04
Validated Y2H
32296183
Intra
SLAIN1 Q8ND83 TBC1D22B Homo sapiens Q9NU19
Validated Y2H
32296183
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Agents

  • Pre-clinical Phase

Pre-clinical Phase

Bioactive Molecules (1)
Cat. No. Product Name
Effect
Purity
Rare Diseases
HY-RS12977 SLAIN1 Human Pre-designed siRNA Set A Pre-designed Set / Unkown

Orthologs Information

Species Symbol Source ID
Canis familiaris SLAIN1 VGNC VGNC:46204
Mus musculus SLAIN1 MGD MGI:2145578
Macaca mulatta SLAIN1 VGNC VGNC:106296
Felis catus SLAIN1 VGNC VGNC:65175
Rattus norvegicus SLAIN1 RGD RGD:1308626
Bos taurus SLAIN1 VGNC VGNC:56645
Others SLAIN1 NCBI