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  2. KDM2A - lysine demethylase 2A Gene

KDM2A - lysine demethylase 2A Gene

Homo sapiens

Also known as FBL7; CXXC8; FBL11; FBXL11; JHDM1A; LILINA

Gene ID: 22992 | Gene type: protein coding

About KDM2A

Cytogenetic location: 11q13.2 Genomic coordinates (GRCh38): 11:67,119,263-67,258,082 (from NCBI)

This gene has 15 transcripts (splice variants), 296 orthologues and 4 paralogues. Ubiquitous expression in testis (RPKM 25.2), bone marrow (RPKM 22.4) and 25 other tissues.

Summary

This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into 3 classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene belongs to the Fbls class and, in addition to an F-box, contains at least six highly degenerated leucine-rich repeats. This family member plays a role in epigenetic silencing. It nucleates at CpG islands and specifically demethylates both mono- and di-methylated lysine-36 of histone H3. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2012]

KDM2A Products(2)

mRNA Protein Name
NM_001256405.2 NP_001243334.1 lysine-specific demethylase 2A isoform b
NM_012308.3 NP_036440.1 lysine-specific demethylase 2A isoform a

KDM2A Protein Structure

JmjC

JmjC: JmjC domain, hydroxylase (199 - 299)

zf-CXXC

zf-CXXC: CXXC zinc finger domain (565 - 609)

F-box

F-box: F-box domain (896 - 934)

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  • 1162 a.a.
Protein Preferred Names Protein Names

lysine-specific demethylase 2A

CXXC-type zinc finger protein 8

Related Diseases

Diseases Alias
Duodenum Adenoma
Ossifying Fibromyxoid Tumor

Ossifying Fibromyxoid Tumour

Ossifying Fibromyxoma

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Mus musculus KDM2A MGD MGI:1354736
Bos taurus KDM2A VGNC VGNC:56269
Macaca mulatta KDM2A VGNC VGNC:73824
Rattus norvegicus KDM2A RGD RGD:1309419
Canis familiaris KDM2A VGNC VGNC:42320
Felis catus KDM2A VGNC VGNC:63069
Others KDM2A NCBI