ITGB7 - integrin subunit beta 7 Gene
Species: Homo sapiens
About ITGB7
This gene has 14 transcripts (splice variants), 154 orthologues and 8 paralogues. Broad expression in spleen (RPKM 15.4), lymph node (RPKM 15.4) and 19 other tissues.
Summary
This gene encodes a protein that is a member of the Integrin superfamily. Members of this family are adhesion receptors that function in signaling from the extracellular matrix to the cell. Integrins are heterodimeric integral membrane proteins composed of an alpha chain and a beta chain. The encoded protein forms dimers with an alpha4 chain or an alphaE chain and plays a role in leukocyte adhesion. Dimerization with alpha4 forms a homing receptor for migration of lymphocytes to the intestinal mucosa and Peyer's patches. Dimerization with alphaE permits binding to the ligand epithelial Cadherin, a calcium-dependent adhesion molecule. Alternate splicing results in multiple transcript variants. Additional alternatively spliced transcript variants of this gene have been described, but their full-length nature is not known. [provided by RefSeq, Sep 2013]
ITGB7 Products (18)
| mRNA | Protein | Name |
|---|---|---|
| NM_000889.3 | NP_000880.1 | integrin beta-7 isoform a precursor |
| NM_001414156.1 | NP_001401085.1 | integrin beta-7 isoform a precursor |
| NM_001414157.1 | NP_001401086.1 | integrin beta-7 isoform a precursor |
| NM_001414158.1 | NP_001401087.1 | integrin beta-7 isoform a precursor |
| NM_001414159.1 | NP_001401088.1 | integrin beta-7 isoform a precursor |
| NM_001414160.1 | NP_001401089.1 | integrin beta-7 isoform a precursor |
| NM_001414161.1 | NP_001401090.1 | integrin beta-7 isoform a precursor |
| NM_001414162.1 | NP_001401091.1 | integrin beta-7 isoform b precursor |
| NM_001414163.1 | NP_001401092.1 | integrin beta-7 isoform b precursor |
| NM_001414164.1 | NP_001401093.1 | integrin beta-7 isoform b precursor |
| NM_001414165.1 | NP_001401094.1 | integrin beta-7 isoform c precursor |
| NM_001414166.1 | NP_001401095.1 | integrin beta-7 isoform c precursor |
| NM_001414167.1 | NP_001401096.1 | integrin beta-7 isoform c precursor |
| NM_001414169.1 | NP_001401098.1 | integrin beta-7 isoform d precursor |
| NM_001414170.1 | NP_001401099.1 | integrin beta-7 isoform d precursor |
| NM_001414171.1 | NP_001401100.1 | integrin beta-7 isoform d precursor |
| NM_001414172.1 | NP_001401101.1 | integrin beta-7 isoform d precursor |
| NM_001414173.1 | NP_001401102.1 | integrin beta-7 isoform e |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables cell adhesion molecule binding |
IMP
IMP: Inferred from mutant phenotype
|
23986478 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
1542691 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in cell-matrix adhesion |
IDA
IDA: Inferred from direct assay
|
22232704 | GOA |
| involved in cell-matrix adhesion |
IMP
IMP: Inferred from mutant phenotype
|
18308860 | GOA |
| involved in cell-matrix adhesion involved in ameboidal cell migration |
IMP
IMP: Inferred from mutant phenotype
|
23986478 | GOA |
| involved in heterotypic cell-cell adhesion |
IMP
IMP: Inferred from mutant phenotype
|
18308860 | GOA |
| involved in integrin-mediated signaling pathway |
IMP
IMP: Inferred from mutant phenotype
|
23986478 | GOA |
| involved in leukocyte tethering or rolling |
IMP
IMP: Inferred from mutant phenotype
|
18308860 | GOA |
| involved in receptor clustering |
IMP
IMP: Inferred from mutant phenotype
|
23986478 | GOA |
| involved in substrate adhesion-dependent cell spreading |
IMP
IMP: Inferred from mutant phenotype
|
23986478 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cell surface |
IDA
IDA: Inferred from direct assay
|
18308860 | GOA |
| part of integrin alpha4-beta7 complex |
IDA
IDA: Inferred from direct assay
|
18308860 | GOA |
| part of integrin alpha4-beta7 complex |
IPI
IPI: Inferred from physical interaction
|
22232704 | GOA |
| part of receptor complex |
IDA
IDA: Inferred from direct assay
|
23382219 | GOA |
ITGB7 Protein Structure
Integrin_beta: Integrin beta chain VWA domain (50 - 476)
Integrin_b_cyt: Integrin beta cytoplasmic domain (747 - 792)
- 0
- 200
- 400
- 600
- 798 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
integrin beta-7 |
|
ITGB7 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
ITGB7 | P26010 | FLNA | Homo sapiens | P21333 | 17690686 | |
|
Intra
|
ITGB7 | P26010 | FLNA | Homo sapiens | P21333 | 17690686 | |
|
Intra
|
ITGB7 | P26010 | ITGA4 | Homo sapiens | P13612 | 14681217 |
ITGB7 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P84217 | ITGB7 Antibody (YA3914) | IHC-P, ICC/IF, FC, ELISA | Human |
| HY-P84217A | ITGB7 Antibody (YA3914)(PBS only) | IHC-P, ICC/IF, FC, ELISA | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Inflammatory Bowel Disease 18 |
|
|
| Arrhythmogenic Right Ventricular Cardiomyopathy |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | ITGB7 | RGD | RGD:2929 |
| Bos taurus | ITGB7 | VGNC | VGNC:30332 |
| Felis catus | ITGB7 | VGNC | VGNC:67856 |
| Canis familiaris | ITGB7 | VGNC | VGNC:42142 |
| Macaca mulatta | ITGB7 | VGNC | VGNC:73790 |
| Mus musculus | ITGB7 | MGD | MGI:96616 |
| Others | ITGB7 | NCBI |