1. Gene
  2. TARBP2 - TARBP2 subunit of RISC loading complex Gene

TARBP2 - TARBP2 subunit of RISC loading complex Gene

Homo sapiens

Also known as LOQS; TRBP; TRBP1; TRBP2

Gene ID: 6895 | Gene type: protein coding

About TARBP2

Cytogenetic location: 12q13.13 Genomic coordinates (GRCh38): 12:53,500,923-53,506,431 (from NCBI)

This gene has 20 transcripts (splice variants), 211 orthologues and 14 paralogues. Ubiquitous expression in placenta (RPKM 7.8), testis (RPKM 6.1) and 25 other tissues.

Summary

HIV-1, the causative agent of acquired immunodeficiency syndrome (AIDS), contains an RNA genome that produces a chromosomally integrated DNA during the replicative cycle. Activation of HIV-1 gene expression by the transactivator Tat is dependent on an RNA regulatory element (TAR) located downstream of the transcription initiation site. The protein encoded by this gene binds between the bulge and the loop of the HIV-1 TAR RNA regulatory element and activates HIV-1 gene expression in synergy with the viral Tat protein. Alternative splicing results in multiple transcript variants encoding different isoforms. This gene also has a pseudogene. [provided by RefSeq, Jul 2008]

TARBP2 Products(3)

mRNA Protein Name
NM_004178.5 NP_004169.3 RISC-loading complex subunit TARBP2 isoform b
NM_134323.2 NP_599150.1 RISC-loading complex subunit TARBP2 isoform a
NM_134324.3 NP_599151.2 RISC-loading complex subunit TARBP2 isoform b

TARBP2 Protein Structure

dsrm

dsrm: Double-stranded RNA binding motif (31 - 95)

dsrm

dsrm: Double-stranded RNA binding motif (160 - 222)

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  • 366 a.a.
Protein Preferred Names Protein Names

RISC-loading complex subunit TARBP2

TAR (HIV) RNA-binding protein 2

Related Diseases

Diseases Alias
Pleuropulmonary Blastoma

PPB

Ppb Familial Tumor And Dysplasia Syndrome

Ppbftds

Pulmonary Blastoma

Blastoma, Pleuropulmonary

Dicer1 Syndrome

Respiratory Tract Neoplasms

Dicer1 Syndrome

Pleuro-Pulmonary Blastoma Familial Tumor Susceptibility Syndrome

Pleuropulmonary Blastoma Familial Tumor Susceptibility Syndrome

Ppb Familial Tumor Susceptibility Syndrome

Dicer1-Related Pleuropulmonary Blastoma Cancer Predisposition Syndrome

Pleuro-Pulmonary Blastoma Familial Tumor Susceptibility

Dicer1-Related Pleuropulmonary Blastoma

Pleuropulmonary Blastoma Familial Tumor And Dysplasia Syndrome

Pleuropulmonary Blastoma Family Tumor Susceptibility Syndrome

Ppbftds

Doid:0081063

Fragile X Syndrome

FXS

Martin-Bell Syndrome

Fraxa Syndrome

Marker X Syndrome

X-Linked Mental Retardation And Macroorchidism

Fragile X Mental Retardation Syndrome

Fra Syndrome

Mental Retardation, X-Linked, Associated With Marxq28

X-Linked Intellectual Disability And Macroorchidism

Frax Syndrome

Symptomatic Form Of Fragile X Syndrome In Female Carriers

Fragile-X Syndrome

Fraxe Syndrome

Immune Deficiency Disease

Immunodeficiency

Primary Immunodeficiency

Primary Immunodeficiency Disease

Immunologic Deficiency Syndromes

Hypoimmunity

Immune Deficiency Disorder

Immunodeficiency Syndrome

Immune Disorder

Primary Immune Deficiency Disorder

Immune System Diseases

Human Immunodeficiency Virus Infection

Hiv - [Human Immunodeficiency Virus Infection]

Hiv Positive Nos

Hiv Disease

Acquired Immune Deficiency Syndrome-Related Complex

Aids-Like Syndrome

Aids-Related Complex Nos

Arc - [Aids-Related Complex]

Immunodeficiency Due To Human Immunodeficiency Virus Infection

Unspecified Human Immunodeficiency Virus Disease

Hiv Disease Nos

Human Immunodeficiency Virus Positive Nos

Hiv Nos

Deficiency Of Complement Initial Pathway

Deficiency Of Complement Terminal Pathway

Cfdd - [Complement Factor D Deficiency]

Immunodeficiency With Nk-Cell - [Natural-Killer Cell] Deficiency

Nonfamilial Hypogammaglobulinaemia

Common Variable Immune Deficiency

Nonfamilial Agammaglobulinaemia

Common Variable Agammaglobulinaemia

Agammaglobulinaemia Nos

Agammaglobulinaemia Antibody Deficiency Syndrome

Hypogammaglobulinaemia Antibody Deficiency Syndrome

Acquired Agammaglobulinaemia Nos

Hypogammaglobulinaemia Nos

Hyper Igm

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Rattus norvegicus TARBP2 RGD RGD:1307375
Macaca mulatta TARBP2 VGNC VGNC:78099
Mus musculus TARBP2 MGD MGI:103027
Canis familiaris TARBP2 VGNC VGNC:47108
Bos taurus TARBP2 VGNC VGNC:35602
Felis catus TARBP2 VGNC VGNC:65954