SERF1B - small EDRK-rich factor 1B Gene

Also Known as h4F5; FAM2B; H4F5C

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 728492

Summary

This gene is part of a 500 kb inverted duplication on chromosome 5q13. This duplicated region contains at least four genes and repetitive elements which make it prone to rearrangements and deletions. The repetitiveness and complexity of the sequence have also caused difficulty in determining the organization of this genomic region. This gene is the centromeric copy which is identical to the telomeric copy. Alternatively spliced transcripts have been documented but it is unclear whether alternative splicing occurs for both the centromeric and telomeric copies of the gene. The gene encodes a protein of unknown function which bears low-level homology with the RNA-binding domain of matrin-cyclophilin, a protein which colocalizes with small nuclear ribonucleoproteins (snRNPs) and the SMN1 gene product. [provided by RefSeq, Jul 2008]
Broad expression in testis (RPKM 16.5), brain (RPKM 11.2) and 25 other tissues.

SERF1B Products (2)

mRNA Protein Name
NM_001178087.2 NP_001171558.1 small EDRK-rich factor 1 isoform 1
NM_022978.3 NP_075267.1 small EDRK-rich factor 1 isoform 2
Molecular Function GO Annotation Evidence References Source
enables protein binding IPI
IPI: Inferred from physical interaction
22854022 GOA
Biological Process GO Annotation Evidence References Source
involved in amyloid fibril formation IMP
IMP: Inferred from mutant phenotype
22854022 GOA
involved in protein destabilization IMP
IMP: Inferred from mutant phenotype
20723760 GOA
Cellular Component GO Annotation Evidence References Source
located in cytosol IMP
IMP: Inferred from mutant phenotype
31034892 GOA
located in nucleus IMP
IMP: Inferred from mutant phenotype
31034892 GOA
part of protein-containing complex IMP
IMP: Inferred from mutant phenotype
31034892 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

SERF1B Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method References
Intra
SERF1A O75920 ELOVL7 Homo sapiens A1L3X0 32296183
Intra
SERF1A O75920 ELOVL7 Homo sapiens A1L3X0 32296183
Intra
SERF1A O75920 AQP6 Homo sapiens Q13520 32296183
Intra
SERF1A O75920 AQP6 Homo sapiens Q13520 32296183
Intra
SERF1A O75920 AQP6 Homo sapiens Q13520 32296183
Intra
SERF1A O75920 GPR152 Homo sapiens Q8TDT2 32296183
Intra
SERF1A O75920 GPR152 Homo sapiens Q8TDT2 32296183
Intra
SERF1A O75920 GPR152 Homo sapiens Q8TDT2 32296183
Intra
SERF1A O75920 CRB3 Homo sapiens Q9BUF7-2 32296183
Intra
SERF1A O75920 CRB3 Homo sapiens Q9BUF7-2 32296183
Intra
SERF1A O75920 CRB3 Homo sapiens Q9BUF7-2 32296183
Intra
SERF1A O75920 RNASEK Homo sapiens Q6P5S7 32296183
Intra
SERF1A O75920 RNASEK Homo sapiens Q6P5S7 32296183
Intra
SERF1A O75920 RNASEK Homo sapiens Q6P5S7 32296183
Intra
SERF1A O75920 ELOVL4 Homo sapiens Q9GZR5 32296183
Intra
SERF1A O75920 ELOVL4 Homo sapiens Q9GZR5 32296183
Intra
SERF1A O75920 ELOVL4 Homo sapiens Q9GZR5 32296183
Intra
SERF1A O75920 CERS4 Homo sapiens Q9HA82 32296183
Intra
SERF1A O75920 CERS4 Homo sapiens Q9HA82 32296183
Intra
SERF1A O75920 CERS4 Homo sapiens Q9HA82 32296183
Intra
SERF1A O75920 ABHD16A Homo sapiens O95870 32296183
Intra
SERF1A O75920 ABHD16A Homo sapiens O95870 32296183
Intra
SERF1A O75920 ABHD16A Homo sapiens O95870 32296183
Intra
SERF1A O75920 TIMMDC1 Homo sapiens Q9NPL8 32296183
Intra
SERF1A O75920 TIMMDC1 Homo sapiens Q9NPL8 32296183
Intra
SERF1A O75920 TIMMDC1 Homo sapiens Q9NPL8 32296183
Intra
SERF1A O75920 TMX2 Homo sapiens Q9Y320 32296183
Intra
SERF1A O75920 TMX2 Homo sapiens Q9Y320 32296183
Intra
SERF1A O75920 TMX2 Homo sapiens Q9Y320 32296183
Intra
SERF1A O75920 REEP4 Homo sapiens Q9H6H4 32296183
Intra
SERF1A O75920 REEP4 Homo sapiens Q9H6H4 32296183
Intra
SERF1A O75920 REEP4 Homo sapiens Q9H6H4 32296183
Intra
SERF1A O75920 TMEM14B Homo sapiens Q9NUH8 32296183
Intra
SERF1A O75920 TMEM14B Homo sapiens Q9NUH8 32296183
Intra
SERF1A O75920 TMEM14B Homo sapiens Q9NUH8 32296183
Cross: Cross-species interaction Intra: Intraspecies interaction