Clock - circadian locomotor output cycles kaput Gene
Also Known as KAT13D; 5330400M04Rik
Species: Mus musculus
Summary
The protein encoded by this gene plays a central role in the regulation of circadian rhythms. The protein encodes a transcription factor of the basic helix-loop-helix (bHLH) family and contains DNA binding Histone Acetyltransferase activity. The encoded protein forms a heterodimer with Arntl (Bmal1) that binds E-box enhancer elements upstream of Period (Per1, Per2, Per3) and Cryptochrome (Cry1, Cry2) genes and activates transcription of these genes. Per and Cry proteins heterodimerize and repress their own transcription by interacting in a feedback loop with Clock/Arntl complexes. Polymorphisms in this gene may be associated with behavioral changes, obesity, and metabolic syndrome. Two transcripts encoding the same protein have been found for this gene. [provided by RefSeq, Jan 2014]
Clock Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_001289826.1 | NP_001276755.1 | circadian locomoter output cycles protein kaput isoform 1 |
| NM_001305222.1 | NP_001292151.1 | circadian locomoter output cycles protein kaput isoform 2 |
| NM_007715.6 | NP_031741.1 | circadian locomoter output cycles protein kaput isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables DNA-binding transcription activator activity, RNA polymerase II-specific |
IDA
IDA: Inferred from direct assay
|
15560782 | MGI |
| enables DNA-binding transcription factor activity |
IDA
IDA: Inferred from direct assay
|
12024206 | MGI |
| enables DNA-binding transcription factor activity, RNA polymerase II-specific |
IDA
IDA: Inferred from direct assay
|
15147242 | MGI |
| enables E-box binding |
IDA
IDA: Inferred from direct assay
|
12738229 | MGI |
| enables RNA polymerase II cis-regulatory region sequence-specific DNA binding |
IDA
IDA: Inferred from direct assay
|
15147242 | MGI |
| enables chromatin DNA binding |
IDA
IDA: Inferred from direct assay
|
24610784 | MGI |
| enables histone acetyltransferase activity |
IMP
IMP: Inferred from mutant phenotype
|
19141540 | MGI |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
9704006 | MGI |
| enables sequence-specific DNA binding |
IDA
IDA: Inferred from direct assay
|
21613214 | MGI |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of CLOCK-BMAL transcription complex |
IPI
IPI: Inferred from physical interaction
|
22653727 | MGI |
| located in chromatoid body |
IDA
IDA: Inferred from direct assay
|
22900038 | MGI |
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
12897057 | MGI |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
12897057 | MGI |
| part of transcription regulator complex |
IDA
IDA: Inferred from direct assay
|
16606840 | MGI |
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
circadian locomoter output cycles protein kaput |
|