PALB2 - partner and localizer of BRCA2 Gene
Also Known as FANCN; PNCA3
Species: Homo sapiens
About PALB2
This gene has 17 transcripts (splice variants), 172 orthologues and is associated with 96 phenotypes. Ubiquitous expression in testis (RPKM 4.0), esophagus (RPKM 2.7) and 25 other tissues.
Summary
This gene encodes a protein that may function in tumor suppression. This protein binds to and colocalizes with the breast Cancer 2 early onset protein (BRCA2) in nuclear foci and likely permits the stable intranuclear localization and accumulation of BRCA2. [provided by RefSeq, Jul 2008]
PALB2 Products (19)
| mRNA | Protein | Name |
|---|---|---|
| NM_001407296.1 | NP_001394225.1 | partner and localizer of BRCA2 isoform 2 |
| NM_001407297.1 | NP_001394226.1 | partner and localizer of BRCA2 isoform 3 |
| NM_001407298.1 | NP_001394227.1 | partner and localizer of BRCA2 isoform 4 |
| NM_001407299.1 | NP_001394228.1 | partner and localizer of BRCA2 isoform 5 |
| NM_001407300.1 | NP_001394229.1 | partner and localizer of BRCA2 isoform 6 |
| NM_001407301.1 | NP_001394230.1 | partner and localizer of BRCA2 isoform 7 |
| NM_001407302.1 | NP_001394231.1 | partner and localizer of BRCA2 isoform 8 |
| NM_001407304.1 | NP_001394233.1 | partner and localizer of BRCA2 isoform 9 |
| NM_001407305.1 | NP_001394234.1 | partner and localizer of BRCA2 isoform 9 |
| NM_001407306.1 | NP_001394235.1 | partner and localizer of BRCA2 isoform 9 |
| NM_001407307.1 | NP_001394236.1 | partner and localizer of BRCA2 isoform 10 |
| NM_001407308.1 | NP_001394237.1 | partner and localizer of BRCA2 isoform 11 |
| NM_001407309.1 | NP_001394238.1 | partner and localizer of BRCA2 isoform 11 |
| NM_001407310.1 | NP_001394239.1 | partner and localizer of BRCA2 isoform 12 |
| NM_001407311.1 | NP_001394240.1 | partner and localizer of BRCA2 isoform 12 |
| NM_001407312.1 | NP_001394241.1 | partner and localizer of BRCA2 isoform 13 |
| NM_001407313.1 | NP_001394242.1 | partner and localizer of BRCA2 isoform 14 |
| NM_001407314.1 | NP_001394243.1 | partner and localizer of BRCA2 isoform 15 |
| NM_024675.4 | NP_078951.2 | partner and localizer of BRCA2 isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables DNA binding |
IDA
IDA: Inferred from direct assay
|
20871616 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
17420451 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in double-strand break repair via homologous recombination |
IDA
IDA: Inferred from direct assay
|
19369211 | GOA |
| involved in double-strand break repair via homologous recombination |
IMP
IMP: Inferred from mutant phenotype
|
26323318 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of DNA repair complex |
IPI
IPI: Inferred from physical interaction
|
19369211 | GOA |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
26833090 | GOA |
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
partner and localizer of BRCA2 |
|
PALB2 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
PALB2 | Q86YC2 | RAD51AP1 | Homo sapiens | Q96B01-2 | 20871616 | |
|
Intra
|
PALB2 | Q86YC2 | RAD51C | Homo sapiens | O43502 | 24141787 | |
|
Intra
|
PALB2 | Q86YC2 | POLH | Homo sapiens | Q9Y253 | 24485656 | |
|
Intra
|
PALB2 | Q86YC2 | POLH | Homo sapiens | Q9Y253 | 24485656 | |
|
Intra
|
PALB2 | Q86YC2 | POLH | Homo sapiens | Q9Y253 | 24485656 | |
|
Intra
|
PALB2 | Q86YC2 | XRCC3 | Homo sapiens | O43542 | 24141787 | |
|
Intra
|
PALB2 | Q86YC2 | RAD51 | Homo sapiens | Q06609 | 33961781 | |
|
Intra
|
PALB2 | Q86YC2 | RAD51 | Homo sapiens | Q06609 | 22193777 | |
|
Intra
|
PALB2 | Q86YC2 | RAD51 | Homo sapiens | Q06609 | 20871616 | |
|
Intra
|
PALB2 | Q86YC2 | RAD51 | Homo sapiens | Q06609 | 24141787 | |
|
Intra
|
PALB2 | Q86YC2 | RAD51 | Homo sapiens | Q06609 | 28319063 | |
|
Intra
|
PALB2 | Q86YC2 | USP11 | Homo sapiens | P51784 | 26649820 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA1 | Homo sapiens | P38398 | 26649820 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA1 | Homo sapiens | P38398 | 26649820 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA1 | Homo sapiens | P38398 | 22193777 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA1 | Homo sapiens | P38398 | 19369211 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA1 | Homo sapiens | P38398 | 19369211 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA1 | Homo sapiens | P38398 | 19369211 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA1 | Homo sapiens | P38398 | 19369211 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA1 | Homo sapiens | P38398 | 26649820 | |
|
Intra
|
PALB2 | Q86YC2 | KEAP1 | Homo sapiens | Q14145 | 34591612 | |
|
Intra
|
PALB2 | Q86YC2 | KEAP1 | Homo sapiens | Q14145 | 32296183 | |
|
Intra
|
PALB2 | Q86YC2 | KEAP1 | Homo sapiens | Q14145 | 33961781 | |
|
Intra
|
PALB2 | Q86YC2 | KEAP1 | Homo sapiens | Q14145 | 26649820 | |
|
Intra
|
PALB2 | Q86YC2 | KEAP1 | Homo sapiens | Q14145 | 32296183 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 19609323 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 26649820 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 24485656 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 22193777 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 22293751 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 19369211 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 17420451 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 24141787 | |
|
Intra
|
PALB2 | Q86YC2 | BRCA2 | Homo sapiens | P51587 | 19609323 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Pancreatic Cancer 3 |
|
|
| Fanconi Anemia, Complementation Group N |
|
|
| Breast Cancer |
|
|
| Inherited Cancer-Predisposing Syndrome |
|
|
| Basal Cell Carcinoma |
|
|
| Islet Cell Tumor |
|
|
| Tumor Predisposition Syndrome 1 |
|
|
| Hereditary Breast Ovarian Cancer Syndrome |
|
|
| Esophageal Atresia |
|
|
| Colonic Benign Neoplasm |
|
|
| Pancreatic Cancer |
|
|
| Ovarian Cancer 1 |
|
|
| Breast-Ovarian Cancer, Familial 1 |
|
|
| Tracheoesophageal Fistula With Or Without Esophageal Atresia |
|
|
| Fanconi Anemia, Complementation Group A |
|
|
| Bap1 Tumor Predisposition Syndrome |
|
|
| Lung Cancer |
|
|
| Colorectal Cancer |
|
|
| Lynch Syndrome I |
|
|
| Hereditary Breast Cancer |
|
|
| Fallopian Tube Carcinoma |
|
|
| Ovarian Cancer |
|
|
| Dysplastic Nevus Syndrome |
|
|
| Diffuse Gastric And Lobular Breast Cancer Syndrome |
|
|
| Diffuse Gastric Cancer |
|
|
| Fanconi Anemia, Complementation Group D1 |
|
|
| Cervical Adenoma Malignum |
|
|
| Cowden Syndrome 1 |
|
|
| Bilateral Breast Cancer |
|
|
| Sporadic Breast Cancer |
|
|
| Li-Fraumeni Syndrome |
|
|
| Hypothyroidism, Congenital, Nongoitrous, 6 |
|
|
| Lobular Neoplasia |
|
|
| Lynch Syndrome |
|
|
| Cowden Syndrome |
|
|
| Familial Adenomatous Polyposis 2 |
|
|
| Mismatch Repair Cancer Syndrome |
|
|
| Fallopian Tube Disease |
|
|
| Pancreatic Signet Ring Cell Adenocarcinoma |
|
|
| Physical Disorder |
|
|
| Breast Lobular Carcinoma |
|
|
| Aplastic Anemia |
|
|
| Autosomal Recessive Cerebellar Ataxia |
|
|
| Melanoma, Cutaneous Malignant 1 |
|
|
| Wilms Tumor 1 |
|
|
| Deficiency Anemia |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Felis catus | PALB2 | VGNC | VGNC:64027 |
| Macaca mulatta | PALB2 | VGNC | VGNC:108148 |
| Mus musculus | PALB2 | MGD | MGI:3040695 |
| Canis familiaris | PALB2 | VGNC | VGNC:44245 |
| Bos taurus | PALB2 | VGNC | VGNC:32556 |
| Rattus norvegicus | PALB2 | RGD | RGD:1304759 |
| Others | PALB2 | NCBI |