EM127
Based on 1 Customer Validation
EM127 (compound 11c) is a SMYD3 covalent inhibitor with high selectivity, high affinity (KD=13 μM) and site-specificity. EM127 effectively inhibits ERK1/2 phosphorylation and reduces transcriptional regulation of SMYD3 target genes. EM127 effectively and prolongedly impairs methyltransferase activity. EM127 can be used in cancer research, particularly in SMYD3 positive tumours.
For research use only. We do not sell to patients.
- Purity : 99.94%
- CAS No.: 1886879-71-5
- Formula: C14H18ClN3O3
- Molecular Weight:311.76
-
Storage:
4°C, stored under nitrogen
* In solvent : -80°C, 6 months; -20°C, 1 month (stored under nitrogen)
All Histone Methyltransferase Isoforms
More
Biological Activity
Description
IC50 & Target
[1]|
SMYD3 |
In Vitro
EM127 (5 μM; 24, 48, 72 h) shows good anti-proliferative activity in MDA-MB-231and HCT116 cells[1].
EM127 (5 μM; 24, 48, 72 h) attenuates the expression of SMYD3 target genes while does not affect expression when SMYD3 is knocked out or expressed at low levels in MDA-MB-231 cells[1].
EM127 (1, 3.5, 5 μM; 48, 72 h) decreases ERK1/2 phosphorylation in a dose- and time-dependent manner in HCT116 and MDA-MB-231cells[1].
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only. Further protocols information, click here.
-
Cell Line:MDA-MB-231, HCT116 cells
-
Concentration:5 μM
-
Incubation Time:24, 48, 72 h
-
Result:Significantly retarded cell proliferation by 48 h.
-
Cell Line:MDA-MB-231 cells
-
Concentration:0.5, 3.5, 5 μM
-
Incubation Time:48 h
-
Result:Significantly reduced the expression of CDK2 and C-MET, the known SMYD3 regulated genes.
Attenuated the abundance of mRNAs of the extracellular matrix component fibronectin 1 (FN1) and N-cadherin (N-CAD).
-
Cell Line:HCT116, MDA-MB-231cells
-
Concentration:1, 3.5, 5 μM
-
Incubation Time:48, 72 h
-
Result:Attenuated ERK1/2 phosphorylation and induced PARP processing at the same concentrations that retarded cell proliferation.
Chemical Information
-
CAS No. 1886879-71-5
-
Appearance Solid
-
Molecular Weight 311.76
-
Formula C14H18ClN3O3
-
Color White to off-white
-
SMILES
O=C(C1=NOC(C2CC2)=C1)NC3CCN(C(CCl)=O)CC3
-
Shipping
Room temperature in continental US; may vary elsewhere.
-
Storage
4°C, stored under nitrogen
* In solvent : -80°C, 6 months; -20°C, 1 month (stored under nitrogen)
Solvent & Solubility
In Vitro:
DMSO : 25 mg/mL (80.19 mM; ultrasonic and warming and heat to 60°C; Hygroscopic DMSO has a significant impact on the solubility of product, please use newly opened DMSO)
Please refer to the solubility information to select the appropriate solvent. Once prepared, please aliquot and store the solution to prevent product inactivation from repeated freeze-thaw cycles.
Storage method and period of stock solution: -80°C, 6 months; -20°C, 1 month (stored under nitrogen). When stored at -80°C, please use it within 6 months. When stored at -20°C, please use it within 1 month.
Please refer to the solubility information to select the appropriate solvent. Once prepared, please aliquot and store the solution to prevent product inactivation from repeated freeze-thaw cycles.
Storage method and period of stock solution: -80°C, 6 months; -20°C, 1 month (stored under nitrogen). When stored at -80°C, please use it within 6 months. When stored at -20°C, please use it within 1 month.
Concentration (start) × Volume (start) = Concentration (final) × Volume (final)
Protocols
-
Kinase activity and phosphorylation assays
Kinase activity assays measure the ability of kinases to transfer phosphate groups from ATP to specific substrates, while phosphorylation assays detect the presence and levels of phosphorylated proteins. Common methods include radiolabeled ATP incorporation (e. g. ,), ADP release detection via bioluminescence (e. g. ,[3]), enzyme-linked immunosorbent assays (ELISA) for phospho-specific epitopes (e. g. ,[6]), and microtiter-based formats for high-throughput screening (e. g. ,[8]). The ADP-Glo assay quantifies kinase activity by measuring ADP produced during phosphorylation using a luciferase-based system. Radiometric assays involve autoradiography or scintillation counting after incorporation of 32P-labeled ATP into substrate proteins. ELISA-based approaches rely on phospho-specific antibodies to detect activated kinases in cell lysates or purified samples.
-
Western Blot
Western blotting (WB) is a commonly used experimental method in molecular biology, biochemistry, and immunogenetics for identifying and quantifying target proteins. It combines gel electrophoresis with immunoassay, enabling researchers to analyze protein expression, post-translational modifications, and molecular weight.
-
Protocol for Kinase activity and phosphorylation assays
Kinase activity assays measure transfer of phosphate from ATP to a protein or peptide substrate, generating phosphorylated substrate, ADP, or incorporated radiolabeled phosphate as the readout; phosphorylation assays measure site-specific phosphorylation in cells or tissues as a proxy for kinase-pathway activation, inhibition, or substrate regulation. Phosphorylation can be detected by phospho-specific Western blot, immunoprecipitation kinase assay, phospho-immunofluorescence, phospho-flow cytometry, luminescent ADP detection, radiolabeled ATP incorporation, or reporter-based pathway assays, and these readouts can be applied to cancer cells, primary neurons, mouse tumors, organoids, inflammatory macrophages, ferroptosis studies, and mitophagy studies when the kinase target is biologically relevant.
Purity & Documentation
-
Data Sheet (271 KB)
-
SDS (252 KB)
- English - EN (252 KB)
- Français - FR (252 KB)
- Deutsch - DE (252 KB)
- Norwegian - NO (252 KB)
- Español - ES (252 KB)
- Swedish - SV (252 KB)
- Italian - IT (252 KB)
- Korean - KR (252 KB)
- Portuguese - PT (252 KB)
-
Handling Instructions (2659 KB)
References
Complete Stock Solution Preparation Table
Please refer to the solubility information to select the appropriate solvent. Once prepared, please aliquot and store the solution to prevent product inactivation from repeated freeze-thaw cycles.
Storage method and period of stock solution: -80°C, 6 months; -20°C, 1 month (stored under nitrogen). When stored at -80°C, please use it within 6 months. When stored at -20°C, please use it within 1 month.
| Optional Solvent | Concentration Solvent Mass | 1 mg | 5 mg | 10 mg | 25 mg |
|---|---|---|---|---|---|
| DMSO | 1 mM | 3.2076 mL | 16.0380 mL | 32.0760 mL | 80.1899 mL |
| 5 mM | 0.6415 mL | 3.2076 mL | 6.4152 mL | 16.0380 mL | |
| 10 mM | 0.3208 mL | 1.6038 mL | 3.2076 mL | 8.0190 mL | |
| 15 mM | 0.2138 mL | 1.0692 mL | 2.1384 mL | 5.3460 mL | |
| 20 mM | 0.1604 mL | 0.8019 mL | 1.6038 mL | 4.0095 mL | |
| 25 mM | 0.1283 mL | 0.6415 mL | 1.2830 mL | 3.2076 mL | |
| 30 mM | 0.1069 mL | 0.5346 mL | 1.0692 mL | 2.6730 mL | |
| 40 mM | 0.0802 mL | 0.4009 mL | 0.8019 mL | 2.0047 mL | |
| 50 mM | 0.0642 mL | 0.3208 mL | 0.6415 mL | 1.6038 mL | |
| 60 mM | 0.0535 mL | 0.2673 mL | 0.5346 mL | 1.3365 mL | |
| 80 mM | 0.0401 mL | 0.2005 mL | 0.4009 mL | 1.0024 mL |