PCBP1 - poly(rC) binding protein 1 Gene
Also Known as HNRPX; HNRPE1; hnRNP-X; HEL-S-85; hnRNP-E1
Species: Homo sapiens
About PCBP1
This gene has 1 transcript (splice variant), 99 orthologues, 12 paralogues and is associated with 43 phenotypes.
Summary
This intronless gene is thought to have been generated by retrotransposition of a fully processed PCBP-2 mRNA. This gene and PCBP-2 have paralogues (PCBP3 and PCBP4) which are thought to have arisen as a result of duplication events of entire genes. The protein encoded by this gene appears to be multifunctional. It along with PCBP-2 and hnRNPK corresponds to the major cellular poly(rC)-binding protein. It contains three K-homologous (KH) domains which may be involved in RNA binding. This encoded protein together with PCBP-2 also functions as translational coactivators of poliovirus RNA via a sequence-specific interaction with stem-loop IV of the IRES and promote poliovirus RNA replication by binding to its 5'-terminal cloverleaf structure. It has also been implicated in translational control of the 15-lipoxygenase mRNA, human Papillomavirus type 16 L2 mRNA, and hepatitis A virus RNA. The encoded protein is also suggested to play a part in formation of a sequence-specific alpha-globin mRNP complex which is associated with alpha-globin mRNA stability. [provided by RefSeq, Jul 2008]
PCBP1 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_006196.4 | NP_006187.2 | poly(rC)-binding protein 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables RNA binding |
IDA
IDA: Inferred from direct assay
|
7556077 | GOA |
| enables mRNA binding |
IDA
IDA: Inferred from direct assay
|
14722620 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
16713569 | GOA |
| enables single-stranded DNA binding |
IDA
IDA: Inferred from direct assay
|
8152927 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in viral RNA genome replication |
IDA
IDA: Inferred from direct assay
|
12414943 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
25468996 | GOA |
PCBP1 Protein Structure
KH_1: KH domain (15 - 75)
KH_1: KH domain (99 - 162)
KH_1: KH domain (282 - 343)
- 0
- 100
- 200
- 300
- 356 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
poly(rC)-binding protein 1 |
|
PCBP1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
PCBP1 | Q15365 | PUF60 | Homo sapiens | Q9UHX1 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | IGF2BP3 | Homo sapiens | O00425 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | IGF2BP3 | Homo sapiens | O00425 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | RBM39 | Homo sapiens | Q14498-2 | 17389360 | |
|
Intra
|
PCBP1 | Q15365 | TLE5 | Homo sapiens | Q08117-2 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | TLE5 | Homo sapiens | Q08117-2 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | RBFOX2 | Homo sapiens | O43251-10 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | RBFOX2 | Homo sapiens | O43251-10 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | RBPMS2 | Homo sapiens | Q6ZRY4 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | RBPMS2 | Homo sapiens | Q6ZRY4 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | RBPMS2 | Homo sapiens | Q6ZRY4 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | RBPMS2 | Homo sapiens | Q6ZRY4 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | PAK1 | Homo sapiens | Q13153 | 17389360 | |
|
Intra
|
PCBP1 | Q15365 | PAK1 | Homo sapiens | Q13153 | 17389360 | |
|
Intra
|
PCBP1 | Q15365 | PAK1 | Homo sapiens | Q13153-1 | 17389360 | |
|
Intra
|
PCBP1 | Q15365 | THAP11 | Homo sapiens | Q96EK4 | 22673507 | |
|
Intra
|
PCBP1 | Q15365 | THAP11 | Homo sapiens | Q96EK4 | 22673507 | |
|
Intra
|
PCBP1 | Q15365 | THAP11 | Homo sapiens | Q96EK4 | 22673507 | |
|
Intra
|
PCBP1 | Q15365 | RBM3 | Homo sapiens | P98179 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | RBM3 | Homo sapiens | P98179 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | PTBP1 | Homo sapiens | P26599 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | PTBP1 | Homo sapiens | P26599 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | RBM39 | Homo sapiens | Q14498 | 17389360 | |
|
Intra
|
PCBP1 | Q15365 | PPIG | Homo sapiens | Q13427 | 22365833 | |
|
Intra
|
PCBP1 | Q15365 | PRPF8 | Homo sapiens | Q6P2Q9 | 22365833 | |
|
Intra
|
PCBP1 | Q15365 | PRPF8 | Homo sapiens | Q6P2Q9 | 22365833 | |
|
Intra
|
PCBP1 | Q15365 | SNRPA | Homo sapiens | P09012 | 25416956 | |
|
Intra
|
PCBP1 | Q15365 | SNRPA | Homo sapiens | P09012 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | SNRPA | Homo sapiens | P09012 | 31515488 | |
|
Intra
|
PCBP1 | Q15365 | SNRPA | Homo sapiens | P09012 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | WBP11 | Homo sapiens | Q9Y2W2 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | WBP11 | Homo sapiens | Q9Y2W2 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | TSC22D4 | Homo sapiens | Q9Y3Q8 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | TSC22D4 | Homo sapiens | Q9Y3Q8 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | KLF1 | Homo sapiens | Q13351 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | KLF1 | Homo sapiens | Q13351 | 32296183 | |
|
Intra
|
PCBP1 | Q15365 | QKI | Homo sapiens | Q96PU8 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | PCBP2 | Homo sapiens | Q15366 | 16713569 | |
|
Intra
|
PCBP1 | Q15365 | PCBP2 | Homo sapiens | Q15366 | 16713569 | |
|
Cross
|
PCBP1 | Q15365 | PA | Influenza A virus | Q67020 | 21994455 | |
|
Cross
|
PCBP1 | Q15365 | GAMMAHV.ORF34 | Murid herpesvirus 4 | O41951 | 22028648 | |
|
Cross
|
PCBP1 | Q15365 | GAMMAHV.ORF34 | Murid herpesvirus 4 | O41951 | 22028648 | |
|
Cross
|
PCBP1 | Q15365 | GAMMAHV.ORF34 | Murid herpesvirus 4 | O41951 | 22028648 | |
|
Cross
|
PCBP1 | Q15365 | GAMMAHV.ORF34 | Murid herpesvirus 4 | O41951 | 22028648 |
Recombinant PCBP1 Proteins
| Cat. No. | Product Name | Accession | Purity |
|---|---|---|---|
| HY-P74649 | PCBP1 Protein, Human (His) | NP_006187.2 (D2-S356) | ≥ 90%, as determined by reducing SDS-PAGE. |
PCBP1 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P83182 | PCBP1 Antibody (YA2927) | WB, IP | Human, Mouse, Rat |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Deafness, Autosomal Recessive 17 |
|
|
| Burkitt Lymphoma |
|
|
| Aceruloplasminemia |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | PCBP1 | RGD | RGD:1561319 |
| Macaca mulatta | PCBP1 | VGNC | VGNC:106194 |
| Felis catus | PCBP1 | VGNC | VGNC:81140 |
| Mus musculus | PCBP1 | MGD | MGI:1345635 |
| Others | PCBP1 | NCBI |