HDAC9 - histone deacetylase 9 Gene
Also Known as HD7; HD9; HD7b; HDAC; HDRP; MITR; HDAC7; HDAC7B; HDAC9B; HDAC9FL
Species: Homo sapiens
About HDAC9
This gene has 32 transcripts (splice variants), 235 orthologues and 10 paralogues. Ubiquitous expression in lymph node (RPKM 2.1), brain (RPKM 2.0) and 24 other tissues.
Summary
Histones play a critical role in transcriptional regulation, cell cycle progression, and developmental events. Histone acetylation/deacetylation alters chromosome structure and affects transcription factor access to DNA. The protein encoded by this gene has sequence homology to members of the histone deacetylase family. This gene is orthologous to the Xenopus and mouse MITR genes. The MITR protein lacks the histone deacetylase catalytic domain. It represses MEF2 activity through recruitment of multicomponent corepressor complexes that include CtBP and HDACs. This encoded protein may play a role in hematopoiesis. Multiple alternatively spliced transcripts have been described for this gene but the full-length nature of some of them has not been determined. [provided by RefSeq, Jul 2008]
HDAC9 Products (41)
| mRNA | Protein | Name |
|---|---|---|
| NM_001204148.3 | NP_001191077.1 | histone deacetylase 9 isoform 10 |
| NM_001321886.2 | NP_001308815.1 | histone deacetylase 9 isoform 25 |
| NM_001321879.2 | NP_001308808.1 | histone deacetylase 9 isoform 22 |
| NM_001204147.3 | NP_001191076.1 | histone deacetylase 9 isoform 9 |
| NM_001321897.2 | NP_001308826.1 | histone deacetylase 9 isoform 20 |
| NM_001321887.2 | NP_001308816.1 | histone deacetylase 9 isoform 26 |
| NR_135835.2 | ||
| NM_001321889.2 | NP_001308818.1 | histone deacetylase 9 isoform 28 |
| NM_001321891.2 | NP_001308820.1 | histone deacetylase 9 isoform 7 |
| NM_001204146.2 | NP_001191075.1 | histone deacetylase 9 isoform 8 |
| NM_001321893.2 | NP_001308822.1 | histone deacetylase 9 isoform 7 |
| NM_001321869.2 | NP_001308798.1 | histone deacetylase 9 isoform 12 |
| NM_001321896.2 | NP_001308825.1 | histone deacetylase 9 isoform 10 |
| NM_014707.4 | NP_055522.1 | histone deacetylase 9 isoform 3 |
| NM_001204145.3 | NP_001191074.1 | histone deacetylase 9 isoform 7 |
| NM_001321888.2 | NP_001308817.1 | histone deacetylase 9 isoform 27 |
| NM_001321884.2 | NP_001308813.1 | histone deacetylase 9 isoform 23 |
| NM_001321876.2 | NP_001308805.1 | histone deacetylase 9 isoform 19 |
| NM_001321902.2 | NP_001308831.1 | histone deacetylase 9 isoform 17 |
| NM_001321895.2 | NP_001308824.1 | histone deacetylase 9 isoform 8 |
| NM_058176.2 | NP_478056.1 | histone deacetylase 9 isoform 1 |
| NM_001321894.2 | NP_001308823.1 | histone deacetylase 9 isoform 8 |
| NM_001321873.2 | NP_001308802.1 | histone deacetylase 9 isoform 16 |
| NM_001321900.2 | NP_001308829.1 | histone deacetylase 9 isoform 3 |
| NM_001321868.2 | NP_001308797.1 | histone deacetylase 9 isoform 11 |
| NM_001321878.2 | NP_001308807.1 | histone deacetylase 9 isoform 21 |
| NM_001321890.2 | NP_001308819.1 | histone deacetylase 9 isoform 29 |
| NM_058177.2 | ||
| NM_001321885.2 | NP_001308814.1 | histone deacetylase 9 isoform 24 |
| NM_178423.3 | NP_848510.1 | histone deacetylase 9 isoform 4 |
| NM_001321870.2 | NP_001308799.1 | histone deacetylase 9 isoform 13 |
| NM_001321877.2 | NP_001308806.1 | histone deacetylase 9 isoform 20 |
| NM_001321899.2 | NP_001308828.1 | histone deacetylase 9 isoform 17 |
| NM_178425.4 | NP_848512.1 | histone deacetylase 9 isoform 5 |
| NM_001321871.2 | NP_001308800.1 | histone deacetylase 9 isoform 14 |
| NM_001321874.2 | NP_001308803.1 | histone deacetylase 9 isoform 17 |
| NM_001321898.2 | NP_001308827.1 | histone deacetylase 9 isoform 24 |
| NM_001321901.2 | NP_001308830.1 | histone deacetylase 9 isoform 23 |
| NM_001321872.2 | NP_001308801.1 | histone deacetylase 9 isoform 15 |
| NM_001204144.3 | NP_001191073.1 | histone deacetylase 9 isoform 6 |
| NM_001321875.2 | NP_001308804.1 | histone deacetylase 9 isoform 18 |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
12590135 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
12590135 | GOA |
| part of transcription regulator complex |
IDA
IDA: Inferred from direct assay
|
15567413 | GOA |
HDAC9 Protein Structure
HDAC4_Gln: Glutamine rich N terminal domain of histone deacetylase 4 (36 - 124)
Hist_deacetyl: Histone deacetylase domain (648 - 972)
- 0
- 200
- 400
- 600
- 800
- 1011 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
histone deacetylase 9 |
|
|
HDAC9 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P83222 | HDAC9 Antibody (YA2967) | WB, IHC-P | Human |
| HY-P83222A | HDAC9 Antibody (YA2967)(PBS only) | WB, IHC-P | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Aortic Aneurysm, Familial Thoracic 1 |
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| Friedreich Ataxia |
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| Alzheimer Disease 19 |
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| Huntington Disease |
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| Medulloblastoma |
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| Schizophrenia |
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| Leukemia, Chronic Lymphocytic |
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| Hematologic Cancer |
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| Ovarian Cancer |
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| Pancreatic Cancer |
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| Acute Promyelocytic Leukemia |
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| Lung Cancer |
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| Cryptogenic Organizing Pneumonia |
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| Colorectal Cancer |
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| Thrombocytopenia |
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| Breast Cancer |
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| Inflammatory Bowel Disease |
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| T-Cell Acute Lymphoblastic Leukemia |
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| Prostate Cancer |
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| Leukemia, Acute Lymphoblastic |
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| Mature T-Cell And Nk-Cell Lymphoma |
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| Spinal Muscular Atrophy |
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| Leukemia, Chronic Myeloid |
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| Primary Cutaneous T-Cell Non-Hodgkin Lymphoma |
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| Amyotrophic Lateral Sclerosis 1 |
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| Myeloma, Multiple |
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Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Canis familiaris | HDAC9 | VGNC | VGNC:50632 |
| Bos taurus | HDAC9 | VGNC | VGNC:50614 |
| Rattus norvegicus | HDAC9 | RGD | RGD:1310748 |
| Mus musculus | HDAC9 | MGD | MGI:1931221 |
| Macaca mulatta | HDAC9 | VGNC | VGNC:73165 |
| Others | HDAC9 | NCBI |