RARA - retinoic acid receptor alpha Gene
Also Known as RAR; NR1B1; RARalpha
Species: Homo sapiens
About RARA
This gene has 10 transcripts (splice variants), 331 orthologues, 18 paralogues and is associated with 80 phenotypes. Ubiquitous expression in lung (RPKM 10.4), spleen (RPKM 8.4) and 25 other tissues.
Summary
This gene represents a nuclear retinoic acid receptor. The encoded protein, retinoic acid receptor alpha, regulates transcription in a ligand-dependent manner. This gene has been implicated in regulation of development, differentiation, Apoptosis, granulopoeisis, and transcription of clock genes. Translocations between this locus and several Other loci have been associated with acute promyelocytic leukemia. Alternatively spliced transcript variants have been found for this locus.[provided by RefSeq, Sep 2010]
RARA Products (13)
| mRNA | Protein | Name |
|---|---|---|
| NM_001024809.4 | NP_001019980.1 | retinoic acid receptor alpha isoform 2 |
| XM_011525095.2 | XP_011523397.1 | retinoic acid receptor alpha isoform X1 |
| NM_001033603.1 | ||
| XM_005257553.2 | XP_005257610.1 | retinoic acid receptor alpha isoform X1 |
| XM_047436507.1 | XP_047292463.1 | retinoic acid receptor alpha isoform X1 |
| NM_001145302.3 | NP_001138774.1 | retinoic acid receptor alpha isoform 4 |
| NM_001145301.3 | NP_001138773.1 | retinoic acid receptor alpha isoform 1 |
| XM_047436508.1 | XP_047292464.1 | retinoic acid receptor alpha isoform X1 |
| XM_047436506.1 | XP_047292462.1 | retinoic acid receptor alpha isoform X1 |
| XM_011525096.2 | XP_011523398.1 | retinoic acid receptor alpha isoform X2 |
| XM_005257554.2 | XP_005257611.1 | retinoic acid receptor alpha isoform X1 |
| XM_005257552.6 | XP_005257609.1 | retinoic acid receptor alpha isoform X3 |
| NM_000964.4 | NP_000955.1 | retinoic acid receptor alpha isoform 1 |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of RNA polymerase II transcription regulator complex |
IDA
IDA: Inferred from direct assay
|
1310351 | GOA |
| located in chromatin |
IDA
IDA: Inferred from direct assay
|
2825025 | GOA |
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
19850744 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
18845237 | GOA |
| located in plasma membrane |
IDA
IDA: Inferred from direct assay
|
2825025 | GOA |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
19917671 | GOA |
| part of transcription regulator complex |
IPI
IPI: Inferred from physical interaction
|
9430642 | GOA |
RARA Protein Structure
zf-C4: Zinc finger, C4 type (two domains) (87 - 155)
Hormone_recep: Ligand-binding domain of nuclear hormone receptor (220 - 394)
- 0
- 100
- 200
- 300
- 400
- 462 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
retinoic acid receptor alpha |
|
|
RARA Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
RARA | P10276 | ACTN4 | Homo sapiens | O43707-1 | 22351778 | |
|
Intra
|
RARA | P10276 | ACTN4 | Homo sapiens | O43707-1 | 22351778 | |
|
Intra
|
RARA | P10276 | SIRT1 | Homo sapiens | Q96EB6 | 19934264 | |
|
Intra
|
RARA | P10276 | BBS4 | Homo sapiens | Q96RK4 | 32296183 | |
|
Intra
|
RARA | P10276 | BBS4 | Homo sapiens | Q96RK4 | 32296183 | |
|
Intra
|
RARA | P10276 | BBS4 | Homo sapiens | Q96RK4 | 32296183 | |
|
Intra
|
RARA | P10276 | NR2C1 | Homo sapiens | P13056-2 | 32296183 | |
|
Intra
|
RARA | P10276 | NCOR1 | Homo sapiens | O75376 | 20543827 | |
|
Intra
|
RARA | P10276 | NCOR1 | Homo sapiens | O75376 | 25303530 | |
|
Intra
|
RARA | P10276 | NCOR1 | Homo sapiens | O75376 | 20543827 | |
|
Intra
|
RARA | P10276 | NCOR1 | Homo sapiens | O75376 | 16606617 | |
|
Intra
|
RARA | P10276 | MCRS1 | Homo sapiens | Q96EZ8 | 32296183 | |
|
Intra
|
RARA | P10276 | PRKDC | Homo sapiens | P78527 | 25303530 | |
|
Intra
|
RARA | P10276 | GNAQ | Homo sapiens | P50148 | 22056876 | |
|
Intra
|
RARA | P10276 | GNAQ | Homo sapiens | P50148 | 22056876 | |
|
Intra
|
RARA | P10276 | GNAQ | Homo sapiens | P50148 | 22056876 | |
|
Intra
|
RARA | P10276 | MED1 | Homo sapiens | Q15648 | 9653119 | |
|
Intra
|
RARA | P10276 | MED1 | Homo sapiens | Q15648 | 25303530 | |
|
Intra
|
RARA | P10276 | MED25 | Homo sapiens | Q71SY5 | 17641689 | |
|
Intra
|
RARA | P10276 | MED25 | Homo sapiens | Q71SY5 | 17641689 | |
|
Intra
|
RARA | P10276 | NCOA1 | Homo sapiens | Q15788 | 16456540 | |
|
Intra
|
RARA | P10276 | NCOA1 | Homo sapiens | Q15788 | 16606617 | |
|
Intra
|
RARA | P10276 | NCOA1 | Homo sapiens | Q15788 | 20543827 | |
|
Intra
|
RARA | P10276 | NCOA1 | Homo sapiens | Q15788 | 20543827 | |
|
Intra
|
RARA | P10276 | EZH2 | Homo sapiens | Q15910 | 17560333 | |
|
Cross
|
RARA | P10276 | Asxl1 | Mus musculus | P59598 | 16606617 | |
|
Cross
|
RARA | P10276 | Asxl1 | Mus musculus | P59598 | 16606617 | |
|
Cross
|
RARA | P10276 | Asxl1 | Mus musculus | P59598 | 16606617 | |
|
Intra
|
RARA | P10276 | PHF8 | Homo sapiens | Q9UPP1-2 | 23518351 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 32296183 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 25416956 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 21516116 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 32296183 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 25416956 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 16189514 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 20211142 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 32296183 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 25303530 | |
|
Intra
|
RARA | P10276 | RXRG | Homo sapiens | P48443 | 31515488 | |
|
Intra
|
RARA | P10276 | PLEKHF2 | Homo sapiens | Q9H8W4 | 32296183 | |
|
Intra
|
RARA | P10276 | PLEKHF2 | Homo sapiens | Q9H8W4 | 32296183 | |
|
Intra
|
RARA | P10276 | PLEKHF2 | Homo sapiens | Q9H8W4 | 32296183 | |
|
Intra
|
RARA | P10276 | NRIP1 | Homo sapiens | P48552 | 17641689 | |
|
Intra
|
RARA | P10276 | NRIP1 | Homo sapiens | P48552 | 25416956 | |
|
Intra
|
RARA | P10276 | RXRB | Homo sapiens | P28702 | 32296183 | |
|
Intra
|
RARA | P10276 | RXRB | Homo sapiens | P28702 | 16189514 | |
|
Intra
|
RARA | P10276 | RXRB | Homo sapiens | P28702 | 20211142 | |
|
Intra
|
RARA | P10276 | RXRB | Homo sapiens | P28702 | 29892012 | |
|
Intra
|
RARA | P10276 | RXRB | Homo sapiens | P28702 | 25303530 | |
|
Intra
|
RARA | P10276 | RXRB | Homo sapiens | P28702 | 29892012 | |
|
Intra
|
RARA | P10276 | RXRB | Homo sapiens | P28702 | 32296183 | |
|
Intra
|
RARA | P10276 | RXRB | Homo sapiens | P28702 | 32296183 | |
|
Intra
|
RARA | P10276 | CCNDBP1 | Homo sapiens | O95273 | 32296183 | |
|
Intra
|
RARA | P10276 | CCNDBP1 | Homo sapiens | O95273 | 32296183 | |
|
Intra
|
RARA | P10276 | TEKT4 | Homo sapiens | Q8WW24 | 31515488 | |
|
Intra
|
RARA | P10276 | TEKT4 | Homo sapiens | Q8WW24 | 25416956 | |
|
Intra
|
RARA | P10276 | ALX1 | Homo sapiens | Q15699 | 32296183 | |
|
Intra
|
RARA | P10276 | ALX1 | Homo sapiens | Q15699 | 32296183 | |
|
Intra
|
RARA | P10276 | ALX1 | Homo sapiens | Q15699 | 32296183 | |
|
Intra
|
RARA | P10276 | PPARG | Homo sapiens | P37231 | 32296183 | |
|
Intra
|
RARA | P10276 | PPARG | Homo sapiens | P37231 | 32296183 | |
|
Intra
|
RARA | P10276 | PPARG | Homo sapiens | P37231 | 32296183 | |
|
Intra
|
RARA | P10276 | RXRA | Homo sapiens | P19793 | 19345331 | |
|
Intra
|
RARA | P10276 | RXRA | Homo sapiens | P19793 | 21478865 | |
|
Intra
|
RARA | P10276 | RXRA | Homo sapiens | P19793 | 21478865 | |
|
Intra
|
RARA | P10276 | RXRA | Homo sapiens | P19793 | 21478865 | |
|
Intra
|
RARA | P10276 | RXRA | Homo sapiens | P19793 | 21478865 | |
|
Intra
|
RARA | P10276 | RXRA | Homo sapiens | P19793 | 21478865 | |
|
Intra
|
RARA | P10276 | RXRA | Homo sapiens | P19793 | 25303530 | |
|
Intra
|
RARA | P10276 | RXRA | Homo sapiens | P19793 | 16769902 | |
|
Intra
|
RARA | P10276 | SUMO1 | Homo sapiens | P63165 | 24819975 | |
|
Intra
|
RARA | P10276 | SUMO1 | Homo sapiens | P63165 | 24819975 | |
|
Intra
|
RARA | P10276 | NCOR2 | Homo sapiens | Q9Y618 | 25303530 | |
|
Intra
|
RARA | P10276 | NCOR2 | Homo sapiens | Q9Y618 | 20543827 | |
|
Intra
|
RARA | P10276 | NCOR2 | Homo sapiens | Q9Y618 | 20543827 | |
|
Intra
|
RARA | P10276 | NCOA3 | Homo sapiens | Q9Y6Q9 | 16456540 | |
|
Intra
|
RARA | P10276 | NCOA3 | Homo sapiens | Q9Y6Q9 | 25303530 | |
|
Intra
|
RARA | P10276 | ZNF423 | Homo sapiens | Q2M1K9 | 19345331 |
RARA Antibodies
| Cat. No. | 상품명 | 신청 | Reactivity |
|---|---|---|---|
| HY-P80308 | Retinoic Acid Receptor alpha Antibody (YA096) | WB, FC | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Intracranial Hypertension, Idiopathic |
|
|
| Leukemia |
|
|
| Hematologic Cancer |
|
|
| Wilms Tumor 1 |
|
|
| Rhabdomyosarcoma |
|
|
| Cleft Lip |
|
|
| Langerhans Cell Histiocytosis |
|
|
| Squamous Cell Carcinoma, Head And Neck |
|
|
| Myeloid Leukemia |
|
|
| Leukemia, Acute Myeloid |
|
|
| Childhood Acute Myeloid Leukemia |
|
|
| Cleft Palate, Isolated |
|
|
| Basal Cell Carcinoma |
|
|
| Breast Cancer |
|
|
| Embryonal Carcinoma |
|
|
| Keratomalacia |
|
|
| Ovarian Cancer |
|
|
| Acute Promyelocytic Leukemia |
|
|
| Acute Leukemia |
|
|
| Teratocarcinoma |
|
|
| Myelodysplastic Syndrome |
|
|
| Juvenile Myelomonocytic Leukemia |
|
|
| Aleukemic Leukemia Cutis |
|
|
| Monocytic Leukemia |
|
|
| Leukemia, Acute Monocytic |
|
|
| Smith-Magenis Syndrome |
|
|
| Leukemia, Chronic Myeloid |
|
|
| Primary Cutaneous T-Cell Non-Hodgkin Lymphoma |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Felis catus | RARA | VGNC | VGNC:69240 |
| Rattus norvegicus | RARA | RGD | RGD:3534 |
| Bos taurus | RARA | VGNC | VGNC:33729 |
| Macaca mulatta | RARA | VGNC | VGNC:76662 |
| Canis familiaris | RARA | VGNC | VGNC:45351 |
| Mus musculus | RARA | MGD | MGI:97856 |
| Others | RARA | NCBI |