PROTAC HDAC degrader-2
PROTAC HDAC degrader-2 is a selective IIb HDACs PROTAC degrader, with DC50s of 13 nM for HDAC6, 29 nM for HDAC10, respectively. PROTAC HDAC degrader-2 exhibits low cytotoxicity against hematological and solid cancer cell lines. PROTAC HDAC degrader-2 can be used for the chemical knockdown of class IIb HDACs.
(Pink: HDAC6 and HDAC10 ligand (HY-174471); Blue: Cereblon ligand (HY-131717); Black: linker).
For research use only. We do not sell to patients.
- Formula: C40H43N7O7
- Molecular Weight:733.81
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Storage:
Please store the product under the recommended conditions in the Certificate of Analysis.
All PROTACs Isoforms
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Biological Activity
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hHDAC6 13 nM (DC50) |
hHDAC10 29 nM (DC50) |
Cereblon |
PROTAC HDAC degrader-2 (Compound AP1) (90 min) demonstrates inhibitory activity against HDAC6 and HDAC10, with IC50 values of 0.04 μM and 0.022 μM in fluorogenic enzyme inhibition assays using Z-Lys(Ac)-AMC or Ac-spermidine-AMC as substrates[1].
PROTAC HDAC degrader-2 (50-1000 nM, 0-1440 min) shows stability comparable to Tubastatin A (HY-13271A) in human plasma[1].
PROTAC HDAC degrader-2 (1-5 μM, 24 h) shows proteasome-dependent and long-lasting degradation effect of the HDAC6 and HDAC10 in MM.1S cells and degrades HDAC6 and HDAC10 in MCF-7 cells[1].
PROTAC HDAC degrader-2 (1 μM, 24 h) causes no relevant HDAC1, HDAC4, HDAC7 or HDAC8 degradation in MM.1S cells[1].
PROTAC HDAC degrader-2 (1 μM, 24 h) induces upregulation of Ac-α-tubulin, a known substrate of HDAC6, comparable to Vorinostat (HY-10221)[1].
PROTAC HDAC degrader-2 (1-5 μM, 6-24 h) induces neosubstrate degradation occurs via CRBN and not HDAC engagement in MM.1S cells[1].
PROTAC HDAC degrader-2 (10 μM, 48 h) induces a significant prolongation of the G1-phase in MM.1S cells[1].
PROTAC HDAC degrader-2 (1-5 μM, 24 h) does not affect the LC3-I and LC3-II levels in MM.1S cells[1].
PROTAC HDAC degrader-2 (10 μM, 24 h) attenuates cell migration significantly in MDA-MB-231 cells[1].
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.
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Cell Line:MM.1S cells
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Concentration:1 μM
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Incubation Time:6 h after Tubastatin A (HY-13271A) (10 μM), Pomalidomide (HY-10984) (10 μM) or Pevonedistat (MLN4924) (HY-70062) (10 μM) treated for 0.5 h
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Result:Induced significant degradation of HDAC6 and HDAC10 alone and recovered the levels of HDAC6 and HDAC10 for the groups with pretreatments.
Recovered the levels of IKZF1 for the groups pretreated with MLN4924 but not Tubastatin A.
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Cell Line:MM.1S cells
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Concentration:5 μM
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Incubation Time:24 h
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Result:Degraded IKZF1 and IKZF3 strongly and reduced GSPT1 levels slightly.
Chemical Information
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Molecular Weight 733.81
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Formula C40H43N7O7
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SMILES
O=C1CCC(C(N1)=O)N2C(C3=CC=CC(NCC(NCCCCCCN4CCC5=C(C6=CC=CC=C6N5CC7=CC=C(C=C7)C(NO)=O)C4)=O)=C3C2=O)=O
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Shipping
Room temperature in continental US; may vary elsewhere.
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Storage
Please store the product under the recommended conditions in the Certificate of Analysis.
Purity & Documentation
References
Calculators
Concentration (start) × Volume (start) = Concentration (final) × Volume (final)