1. Cell Cycle/DNA Damage Epigenetics
  2. HDAC CDK
  3. CDK/HDAC-IN-3

CDK/HDAC-IN-3 is an orally active HDACs/CDKs dual inhibitor. CDK/HDAC-IN-3 has potent and selective inhibition of CDK9, CDK12, CDK13, HDAC1, HDAC2 and HDAC3 with IC50 values of 98.32 nM, 98.85 nM, 100 nM, 62.12 nM, 93.28nM and 82.87 nM. CDK/HDAC-IN-3 can be used for the acute myeloid leukemia (AML) .

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CDK/HDAC-IN-3 Chemical Structure

CDK/HDAC-IN-3 Chemical Structure

CAS No. : 2944087-54-9

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Description

CDK/HDAC-IN-3 is an orally active HDACs/CDKs dual inhibitor. CDK/HDAC-IN-3 has potent and selective inhibition of CDK9, CDK12, CDK13, HDAC1, HDAC2 and HDAC3 with IC50 values of 98.32 nM, 98.85 nM, 100 nM, 62.12 nM, 93.28nM and 82.87 nM. CDK/HDAC-IN-3 can be used for the acute myeloid leukemia (AML) [1].

IC50 & Target

IC50: 98.32 nM (CDK9), 98.85 nM (CDK12), 100 nM (CDK13), 62.12 nM (HDAC1), 93.28nM (HDAC2) and 82.87 nM (HDAC3), 0.72 μM (U937 cell), 1.43μM (HL-60 cell), 1.63μM (SKNO-1 cell) and 0.89 μM (Kaumi-1 cell)[1].

In Vitro

CDK/HDAC-IN-3 (compound 33a) (1μM) has potent and selective inhibition of CDK9, CDK12, CDK13, HDAC1, HDAC2 and HDAC3 with IC50 values of 98.32 nM, 98.85 nM, 100 nM, 62.12 nM, 93.28nM and 82.87 nM, respectively[1].
CDK/HDAC-IN-3 (0.5 μM, 1.0 μM) significantly induces differentiation of leukemic stem-like cells and inhibits AML proliferation[1].
CDK/HDAC-IN-3 (0.5 μM, 1.0 μM, 2.0 μM) significantly induced differentiation of LSCs[1].
CDK/HDAC-IN-3 has inhibitory effect for U937, HL-60, SKNO-1 and Kaumi-1 cell with IC50 values of 0.72 μM, 1.43μM, 1.63μM and 0.89 μM, respectively[1].

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

Cell Proliferation Assay[1]

Cell Line: Human leukemia cell lines Kaumi-1, Skno-1, HL-60 and U937
Concentration: At different concentrations
Incubation Time: 72 h
Result: Showed strong growth inhibitory potency against AML cells.

Western Blot Analysis[1]

Cell Line: HL-60 cell
Concentration: 0, 30, 100, 300, 1000 nM
Incubation Time: 6 h
Result: Inhibited the downstream signaling of HDAC and CDK9 in a dose-dependent manner.

Apoptosis Analysis[1]

Cell Line: HL-60 and U937 cell
Concentration: 0.2, 0.5, 1.0, 2.0 μM
Incubation Time: 48 h
Result: Induced apoptosis of AML cells.
In Vivo

CDK/HDAC-IN-3 (compound 33a) (i.v., p.o.; 5, 25 mg/kg) has relatively adequate oral bioavailability[1].

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

Animal Model: Sprague-Dawley male rats (220-350 g)[1]
Dosage: 5 mg/kg and 25 mg/kg
Administration: IV and PO
Result:
PK parameters i.v (5 mg/Kg) p.o (25 mg/Kg)
Cmax(ng/L) 3644.00 1426.00
T1/2(h) 0.11 1.37
TMax(h) NA 0.75
Clearance (mL/h/kg) 5307.00 1726.00
MRT (h) 0.39 1.27
AUC (ng.h/mL) 836.00 2368.00
F% NA 56.70%
Molecular Weight

509.34

Formula

C24H18Cl2N6O3

CAS No.
SMILES

NC1=C(C=CC=C1)NC(C2=CC=C(C=C2)NC(C3=NNC=C3NC(C4=C(C=CC=C4Cl)Cl)=O)=O)=O

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Please store the product under the recommended conditions in the Certificate of Analysis.

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