CDK9 - cyclin dependent kinase 9 Gene
Also Known as TAK; C-2k; CTK1; CDC2L4; PITALRE
Species: Homo sapiens
About CDK9
This gene has 5 transcripts (splice variants), 208 orthologues and 26 paralogues. Ubiquitous expression in ovary (RPKM 32.0), spleen (RPKM 23.0) and 25 other tissues.
Summary
The protein encoded by this gene is a member of the cyclin-dependent protein kinase (CDK) family. CDK family members are highly similar to the gene products of S. cerevisiae cdc28, and S. pombe cdc2, and known as important cell cycle regulators. This kinase was found to be a component of the multiprotein complex TAK/P-TEFb, which is an elongation factor for RNA polymerase II-directed transcription and functions by phosphorylating the C-terminal domain of the largest subunit of RNA polymerase II. This protein forms a complex with and is regulated by its regulatory subunit cyclin T or cyclin K. HIV-1 Tat protein was found to interact with this protein and cyclin T, which suggested a possible involvement of this protein in AIDS. [provided by RefSeq, Jul 2008]
CDK9 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_001261.4 | NP_001252.1 | cyclin-dependent kinase 9 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables 7SK snRNA binding |
IDA
IDA: Inferred from direct assay
|
11713533 | GOA |
| enables DNA binding |
IDA
IDA: Inferred from direct assay
|
16109376 | GOA |
| enables RNA polymerase II CTD heptapeptide repeat kinase activity |
IDA
IDA: Inferred from direct assay
|
9499409 | GOA |
| enables cyclin-dependent protein serine/threonine kinase activity |
IDA
IDA: Inferred from direct assay
|
12037670 | GOA |
| enables kinase activity |
IDA
IDA: Inferred from direct assay
|
22959624 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
9499409 | GOA |
| enables protein serine/threonine kinase activity |
IDA
IDA: Inferred from direct assay
|
14701750 | GOA |
| enables transcription coactivator binding |
IPI
IPI: Inferred from physical interaction
|
12037672 | GOA |
| enables transcription elongation factor activity |
IDA
IDA: Inferred from direct assay
|
14580347 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of P-TEFb complex |
IDA
IDA: Inferred from direct assay
|
18483487 | GOA |
| located in PML body |
IDA
IDA: Inferred from direct assay
|
18250157 | GOA |
| part of cyclin/CDK positive transcription elongation factor complex |
IDA
IDA: Inferred from direct assay
|
9499409 | GOA |
| part of cyclin/CDK positive transcription elongation factor complex |
IPI
IPI: Inferred from physical interaction
|
9499409 | GOA |
| is active in nucleus |
IDA
IDA: Inferred from direct assay
|
14701750 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
9499409 | GOA |
| part of transcription elongation factor complex |
IDA
IDA: Inferred from direct assay
|
22195968 | GOA |
CDK9 Protein Structure
Pkinase: Protein kinase domain (19 - 315)
- 0
- 100
- 200
- 300
- 372 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
cyclin-dependent kinase 9 |
|
|
CDK9 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
CDK9 | P50750 | CLSPN | Homo sapiens | Q9HAW4 | 20930849 | |
|
Intra
|
CDK9 | P50750 | CLSPN | Homo sapiens | Q9HAW4 | 20930849 | |
|
Intra
|
CDK9 | P50750 | LARP7 | Homo sapiens | Q4G0J3 | 18483487 | |
|
Intra
|
CDK9 | P50750 | LARP7 | Homo sapiens | Q4G0J3 | 26659056 | |
|
Intra
|
CDK9 | P50750 | LARP7 | Homo sapiens | Q4G0J3 | 20562857 | |
|
Intra
|
CDK9 | P50750 | LARP7 | Homo sapiens | Q4G0J3 | 32707033 | |
|
Intra
|
CDK9 | P50750 | LARP7 | Homo sapiens | Q4G0J3 | 35271311 | |
|
Intra
|
CDK9 | P50750 | LARP7 | Homo sapiens | Q4G0J3 | 33961781 | |
|
Intra
|
CDK9 | P50750 | LARP7 | Homo sapiens | Q4G0J3 | 23602568 | |
|
Intra
|
CDK9 | P50750 | LARP7 | Homo sapiens | Q4G0J3 | 23455922 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 33961781 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 22959624 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 21729782 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 18566585 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 21533037 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 20153263 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 24981860 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 20562857 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 23602568 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 18483487 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 23455922 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 19914168 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 32707033 | |
|
Intra
|
CDK9 | P50750 | CCNT1 | Homo sapiens | O60563 | 20535204 | |
|
Intra
|
CDK9 | P50750 | HEXIM1 | Homo sapiens | O94992 | 20562857 | |
|
Intra
|
CDK9 | P50750 | HEXIM1 | Homo sapiens | O94992 | 33961781 | |
|
Intra
|
CDK9 | P50750 | HEXIM1 | Homo sapiens | O94992 | 23455922 | |
|
Intra
|
CDK9 | P50750 | HEXIM1 | Homo sapiens | O94992 | 18483487 | |
|
Intra
|
CDK9 | P50750 | HEXIM1 | Homo sapiens | O94992 | 32707033 | |
|
Intra
|
CDK9 | P50750 | HEXIM1 | Homo sapiens | O94992 | 35271311 | |
|
Intra
|
CDK9 | P50750 | HEXIM1 | Homo sapiens | O94992 | 21533037 | |
|
Intra
|
CDK9 | P50750 | HEXIM1 | Homo sapiens | O94992 | 24360279 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583 | 35271311 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583 | 21729782 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583 | 32707033 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583 | 24981860 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583 | 33961781 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583 | 23602568 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583 | 23455922 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583 | 9499409 | |
|
Intra
|
CDK9 | P50750 | CDC37 | Homo sapiens | Q16543 | 23455922 | |
|
Intra
|
CDK9 | P50750 | CDC37 | Homo sapiens | Q16543 | 33961781 | |
|
Intra
|
CDK9 | P50750 | CDC37 | Homo sapiens | Q16543 | 32707033 | |
|
Intra
|
CDK9 | P50750 | CDC37 | Homo sapiens | Q16543 | 35271311 | |
|
Intra
|
CDK9 | P50750 | CDC37 | Homo sapiens | Q16543 | 25036637 | |
|
Intra
|
CDK9 | P50750 | CDC37 | Homo sapiens | Q16543 | 24981860 | |
|
Intra
|
CDK9 | P50750 | HSP90AA1 | Homo sapiens | P07900 | 25036637 | |
|
Intra
|
CDK9 | P50750 | HSP90AA1 | Homo sapiens | P07900 | 33961781 | |
|
Intra
|
CDK9 | P50750 | HSP90AA1 | Homo sapiens | P07900 | 23455922 | |
|
Intra
|
CDK9 | P50750 | HSP90AA1 | Homo sapiens | P07900 | 32707033 | |
|
Intra
|
CDK9 | P50750 | FKBP5 | Homo sapiens | Q13451 | 25036637 | |
|
Intra
|
CDK9 | P50750 | FKBP5 | Homo sapiens | Q13451 | 24981860 | |
|
Intra
|
CDK9 | P50750 | FKBP5 | Homo sapiens | Q13451 | 23602568 | |
|
Intra
|
CDK9 | P50750 | FKBP5 | Homo sapiens | Q13451 | 33961781 | |
|
Intra
|
CDK9 | P50750 | FKBP5 | Homo sapiens | Q13451 | 23455922 | |
|
Intra
|
CDK9 | P50750 | FKBP5 | Homo sapiens | Q13451 | 32707033 | |
|
Intra
|
CDK9 | P50750 | HSP90AB1 | Homo sapiens | P08238 | 33961781 | |
|
Intra
|
CDK9 | P50750 | HSP90AB1 | Homo sapiens | P08238 | 23455922 | |
|
Intra
|
CDK9 | P50750 | HSP90AB1 | Homo sapiens | P08238 | 32707033 | |
|
Intra
|
CDK9 | P50750 | STAT3 | Homo sapiens | P40763 | 15286705 | |
|
Intra
|
CDK9 | P50750 | ATRIP | Homo sapiens | Q8WXE1 | 20930849 | |
|
Intra
|
CDK9 | P50750 | ATRIP | Homo sapiens | Q8WXE1 | 20930849 | |
|
Intra
|
CDK9 | P50750 | JMJD6 | Homo sapiens | Q6NYC1 | 24360279 | |
|
Intra
|
CDK9 | P50750 | JMJD6 | Homo sapiens | Q6NYC1 | 24360279 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583-2 | 9499409 | |
|
Intra
|
CDK9 | P50750 | CCNT2 | Homo sapiens | O60583-1 | 9499409 | |
|
Intra
|
CDK9 | P50750 | ATR | Homo sapiens | Q13535 | 20930849 | |
|
Intra
|
CDK9 | P50750 | ATR | Homo sapiens | Q13535 | 20930849 | |
|
Cross
|
CDK9 | P50750 | tat | Human immunodeficiency virus | P04608 | 20535204 |
CDK9 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P80614 | CDK9 Antibody (YA509) | WB, IHC-F, IHC-P, ICC/IF, IP | Human, Mouse, Rat |
| HY-P80614A | CDK9 Antibody (YA509)(PBS only) | WB, IHC-F, IHC-P, ICC/IF, IP | Human, Mouse, Rat |
| HY-P85098 | CDK9 Antibody (YA4790) | WB, IHC-P, ICC/IF, ELISA | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Leukemia, Acute Myeloid |
|
|
| Male Infertility |
|
|
| Pontocerebellar Hypoplasia, Type 1e |
|
|
| Mantle Cell Lymphoma |
|
|
| Hypothyroidism, Congenital, Nongoitrous, 6 |
|
|
| Nut Midline Carcinoma |
|
|
| Leukemia, Chronic Lymphocytic |
|
|
| Human Immunodeficiency Virus Infectious Disease |
|
|
| Herpes Simplex |
|
|
| Immune Deficiency Disease |
|
|
| Charge Syndrome |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | CDK9 | MGD | MGI:1328368 |
| Macaca mulatta | CDK9 | VGNC | VGNC:104886 |
| Canis familiaris | CDK9 | VGNC | VGNC:39062 |
| Felis catus | CDK9 | VGNC | VGNC:102911 |
| Bos taurus | CDK9 | VGNC | VGNC:27136 |
| Rattus norvegicus | CDK9 | RGD | RGD:1359638 |
| Others | CDK9 | NCBI |