HDAC2 - histone deacetylase 2 Gene
Also Known as HD2; RPD3; YAF1; KDAC2
Species: Homo sapiens
About HDAC2
This gene has 17 transcripts (splice variants), 205 orthologues and 10 paralogues. Ubiquitous expression in testis (RPKM 14.8), endometrium (RPKM 10.6) and 25 other tissues.
Summary
This gene product belongs to the histone deacetylase family. Histone deacetylases act via the formation of large multiprotein complexes, and are responsible for the deacetylation of lysine residues at the N-terminal regions of core histones (H2A, H2B, H3 and H4). This protein forms transcriptional repressor complexes by associating with many different proteins, including YY1, a mammalian zinc-finger transcription factor. Thus, it plays an important role in transcriptional regulation, cell cycle progression and developmental events. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2010]
HDAC2 Products (4)
| mRNA | Protein | Name |
|---|---|---|
| NR_033441.2 | ||
| NR_073443.2 | ||
| NM_001527.4 | NP_001518.3 | histone deacetylase 2 |
| XM_047418692.1 | XP_047274648.1 | histone deacetylase 2 isoform X1 |
| Molecular Function GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| enables NF-kappaB binding |
IPI
IPI: Inferred from physical interaction
|
17785205 | GOA |
| enables RNA polymerase II-specific DNA-binding transcription factor binding |
IPI
IPI: Inferred from physical interaction
|
17827154 | GOA |
| enables enzyme binding |
IPI
IPI: Inferred from physical interaction
|
11062478 | GOA |
| enables histone binding |
IDA
IDA: Inferred from direct assay
|
19276356 | GOA |
| enables histone deacetylase activity |
IDA
IDA: Inferred from direct assay
|
16642021 | GOA |
| enables histone deacetylase binding |
IPI
IPI: Inferred from physical interaction
|
28046085 | GOA |
| enables histone decrotonylase activity |
IDA
IDA: Inferred from direct assay
|
28497810 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
9150135 | GOA |
| enables protein de-2-hydroxyisobutyrylase activity |
IDA
IDA: Inferred from direct assay
|
29192674 | GOA |
| enables protein lysine deacetylase activity |
IMP
IMP: Inferred from mutant phenotype
|
19041327 | GOA |
| Cellular Component GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| part of ESC/E(Z) complex |
IDA
IDA: Inferred from direct assay
|
20075857 | GOA |
| part of NuRD complex |
IDA
IDA: Inferred from direct assay
|
17827154 | GOA |
| part of Sin3-type complex |
IDA
IDA: Inferred from direct assay
|
14966270 | GOA |
| located in chromosome, telomeric region |
IDA
IDA: Inferred from direct assay
|
25150861 | GOA |
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
24970816 | GOA |
| part of histone deacetylase complex |
IDA
IDA: Inferred from direct assay
|
9651585 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
18347167 | GOA |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
28046085 | GOA |
HDAC2 Protein Structure
Hist_deacetyl: Histone deacetylase domain (26 - 319)
- 0
- 100
- 200
- 300
- 400
- 488 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
histone deacetylase 2 |
|
|
HDAC2 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | Verweise |
|---|---|---|---|---|---|---|---|
|
Cross
|
HDAC2 | Q92769 | P0DTD1-PRO_0000449623 | SARS-CoV-2 | P0DTD1-PRO_0000449623 | 33060197 | |
|
Intra
|
HDAC2 | Q92769 | ZNF516 | Homo sapiens | Q92618 | 35271311 | |
|
Intra
|
HDAC2 | Q92769 | HDAC1 | Homo sapiens | Q13547 | 23752268 | |
|
Intra
|
HDAC2 | Q92769 | HDAC1 | Homo sapiens | Q13547 | 26949739 | |
|
Intra
|
HDAC2 | Q92769 | HDAC1 | Homo sapiens | Q13547 | 21258344 | |
|
Intra
|
HDAC2 | Q92769 | HDAC1 | Homo sapiens | Q13547 | 22416134 | |
|
Intra
|
HDAC2 | Q92769 | HDAC1 | Homo sapiens | Q13547 | 35271311 | |
|
Intra
|
HDAC2 | Q92769 | HDAC1 | Homo sapiens | Q13547 | 9150135 | |
|
Intra
|
HDAC2 | Q92769 | SIN3A | Homo sapiens | Q96ST3 | 26949739 | |
|
Intra
|
HDAC2 | Q92769 | SIN3A | Homo sapiens | Q96ST3 | 21258344 | |
|
Intra
|
HDAC2 | Q92769 | SIN3A | Homo sapiens | Q96ST3 | 35271311 | |
|
Intra
|
HDAC2 | Q92769 | SIN3A | Homo sapiens | Q96ST3 | 16254079 | |
|
Intra
|
HDAC2 | Q92769 | SIN3A | Homo sapiens | Q96ST3 | 23752268 | |
|
Intra
|
HDAC2 | Q92769 | CSNK2A1 | Homo sapiens | P68400 | 35271311 | |
|
Intra
|
HDAC2 | Q92769 | SUV39H1 | Homo sapiens | O43463 | 12711603 | |
|
Intra
|
HDAC2 | Q92769 | MYC | Homo sapiens | P01106 | 20195357 | |
|
Intra
|
HDAC2 | Q92769 | BCL11B | Homo sapiens | Q9C0K0 | 17245431 | |
|
Intra
|
HDAC2 | Q92769 | BCL11B | Homo sapiens | Q9C0K0 | 23752268 | |
|
Intra
|
HDAC2 | Q92769 | MTA1 | Homo sapiens | Q13330 | 23752268 | |
|
Intra
|
HDAC2 | Q92769 | MTA1 | Homo sapiens | Q13330 | 21258344 | |
|
Intra
|
HDAC2 | Q92769 | MTA1 | Homo sapiens | Q13330 | 26949739 | |
|
Intra
|
HDAC2 | Q92769 | MTA1 | Homo sapiens | Q13330 | 35271311 | |
|
Intra
|
HDAC2 | Q92769 | MTA1 | Homo sapiens | Q13330 | 20651739 | |
|
Intra
|
HDAC2 | Q92769 | BRMS1 | Homo sapiens | Q9HCU9 | 21258344 | |
|
Intra
|
HDAC2 | Q92769 | BRMS1 | Homo sapiens | Q9HCU9 | 16919237 | |
|
Intra
|
HDAC2 | Q92769 | BRMS1 | Homo sapiens | Q9HCU9 | 23752268 | |
|
Intra
|
HDAC2 | Q92769 | SRA1 | Homo sapiens | Q9HD15 | 20398657 | |
|
Intra
|
HDAC2 | Q92769 | DAXX | Homo sapiens | Q9UER7 | 12140263 | |
|
Intra
|
HDAC2 | Q92769 | MBD1 | Homo sapiens | Q9UIS9 | 12711603 | |
|
Cross
|
HDAC2 | Q92769 | K8 | Human herpesvirus 8 | Q2HR82 | 22416134 | |
|
Intra
|
HDAC2 | Q92769 | RFX5 | Homo sapiens | P48382 | 16464847 | |
|
Intra
|
HDAC2 | Q92769 | RFX5 | Homo sapiens | P48382 | 16464847 |
HDAC2 Antibodies
| Art. -Nr. | Produktname | Anwendung | Reactivity |
|---|---|---|---|
| HY-P80151 | HDAC2 Antibody (YA393) | WB, ICC/IF, IHC-P, IP, FC | Human, Mouse, Rat |
| HY-P80699 | HDAC2 Antibody (YA742) | WB, ICC/IF | Human, Mouse, Rat, Monkey |
| HY-P80699A | HDAC2 Antibody (YA742)(PBS only) | WB, ICC/IF | Human, Mouse, Rat, Monkey |
| HY-P86612 | HDAC2 Antibody (YA6304) | WB, IHC-P, ICC/IF, IP, ELISA | Human, Mouse, Rat |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Asthma |
|
|
| Acute Promyelocytic Leukemia |
|
|
| Leukemia, Acute Myeloid |
|
|
| Chromosome 16p13.3 Deletion Syndrome, Proximal |
|
|
| Pulmonary Disease, Chronic Obstructive |
|
|
| Muscular Dystrophy |
|
|
| Primary Hyperoxaluria |
|
|
| Optic Atrophy 10 With Or Without Ataxia, Mental Retardation, And Seizures |
|
|
| Prostate Cancer |
|
|
| Cystic Fibrosis |
|
|
| Colorectal Cancer |
|
|
| Hutchinson-Gilford Progeria Syndrome |
|
|
| Lung Disease |
|
|
| Peripheral T-Cell Lymphoma |
|
|
| Mature T-Cell And Nk-Cell Lymphoma |
|
|
| Rett Syndrome |
|
|
| Nervous System Disease |
|
|
| Otopalatodigital Syndrome, Type I |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | HDAC2 | RGD | RGD:619976 |
| Canis familiaris | HDAC2 | VGNC | VGNC:49101 |
| Mus musculus | HDAC2 | MGD | MGI:1097691 |
| Bos taurus | HDAC2 | VGNC | VGNC:50610 |
| Felis catus | HDAC2 | VGNC | VGNC:97454 |
| Macaca mulatta | HDAC2 | VGNC | VGNC:73358 |
| Others | HDAC2 | NCBI |