HDAC3 - histone deacetylase 3 Gene
Also Known as HD3; RPD3; KDAC3; RPD3-2
Species: Homo sapiens
About HDAC3
This gene has 16 transcripts (splice variants), 155 orthologues and 10 paralogues. Ubiquitous expression in lymph node (RPKM 21.1), adrenal (RPKM 20.9) and 25 other tissues.
Summary
Histones play a critical role in transcriptional regulation, cell cycle progression, and developmental events. Histone acetylation/deacetylation alters chromosome structure and affects transcription factor access to DNA. The protein encoded by this gene belongs to the histone deacetylase/acuc/apha family. It has histone deacetylase activity and represses transcription when tethered to a promoter. It may participate in the regulation of transcription through its binding with the zinc-finger transcription factor YY1. This protein can also down-regulate p53 function and thus modulate cell growth and Apoptosis. This gene is regarded as a potential tumor suppressor gene. [provided by RefSeq, Jul 2008]
HDAC3 Products (10)
| mRNA | Protein | Name |
|---|---|---|
| NR_149169.2 | ||
| NM_001355041.2 | NP_001341970.1 | histone deacetylase 3 isoform 4 |
| NR_149167.2 | ||
| NM_001355040.2 | NP_001341969.1 | histone deacetylase 3 isoform 3 |
| NR_149166.2 | ||
| NR_149164.2 | ||
| NM_003883.4 | NP_003874.2 | histone deacetylase 3 isoform 2 |
| NR_149168.2 | ||
| NR_149165.2 | ||
| NM_001355039.2 | NP_001341968.1 | histone deacetylase 3 isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables NF-kappaB binding |
IPI
IPI: Inferred from physical interaction
|
17785205 | GOA |
| enables chromatin binding |
IDA
IDA: Inferred from direct assay
|
16569215 | GOA |
| enables cyclin binding |
IPI
IPI: Inferred from physical interaction
|
18417529 | GOA |
| enables enzyme binding |
IPI
IPI: Inferred from physical interaction
|
11641274 | GOA |
| enables histone deacetylase activity |
IDA
IDA: Inferred from direct assay
|
28497810 | GOA |
| enables histone deacetylase activity |
IMP
IMP: Inferred from mutant phenotype
|
16924111 | GOA |
| enables histone deacetylase binding |
IPI
IPI: Inferred from physical interaction
|
10869435 | GOA |
| enables histone decrotonylase activity |
IDA
IDA: Inferred from direct assay
|
28497810 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
11006275 | GOA |
| enables protein de-2-hydroxyisobutyrylase activity |
IDA
IDA: Inferred from direct assay
|
29192674 | GOA |
| enables protein decrotonylase activity |
IDA
IDA: Inferred from direct assay
|
34608293 | GOA |
| enables protein lysine deacetylase activity |
IDA
IDA: Inferred from direct assay
|
15653507 | GOA |
| enables transcription corepressor activity |
IDA
IDA: Inferred from direct assay
|
16569215 | GOA |
| enables transcription corepressor activity |
IMP
IMP: Inferred from mutant phenotype
|
12628926 | GOA |
| enables transcription corepressor binding |
IPI
IPI: Inferred from physical interaction
|
10898795 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
25190803 | GOA |
| located in cytosol |
IDA
IDA: Inferred from direct assay
|
21030595 | GOA |
| part of histone deacetylase complex |
IDA
IDA: Inferred from direct assay
|
18326024 | GOA |
| located in mitotic spindle |
IDA
IDA: Inferred from direct assay
|
18326024 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
18326024 | GOA |
| part of transcription repressor complex |
IDA
IDA: Inferred from direct assay
|
11804585 | GOA |
HDAC3 Protein Structure
Hist_deacetyl: Histone deacetylase domain (18 - 314)
- 0
- 100
- 200
- 300
- 400
- 428 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
histone deacetylase 3 |
|
|
HDAC3 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
HDAC3 | O15379 | AKAP8 | Homo sapiens | O43823 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | AKAP8 | Homo sapiens | O43823 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | AKAP8 | Homo sapiens | O43823 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | SUZ12 | Homo sapiens | Q15022 | 23079660 | |
|
Intra
|
HDAC3 | O15379 | NCOR1 | Homo sapiens | O75376 | 23752268 | |
|
Intra
|
HDAC3 | O15379 | NCOR1 | Homo sapiens | O75376 | 35271311 | |
|
Intra
|
HDAC3 | O15379 | NCOR1 | Homo sapiens | O75376 | 11013263 | |
|
Intra
|
HDAC3 | O15379 | NCOR1 | Homo sapiens | O75376 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | NCOR1 | Homo sapiens | O75376 | 21258344 | |
|
Cross
|
HDAC3 | O15379 | Ncor1 | Mus musculus | Q60974 | 16917504 | |
|
Cross
|
HDAC3 | O15379 | Ncor1 | Mus musculus | Q60974 | 17956988 | |
|
Intra
|
HDAC3 | O15379 | AKAP8L | Homo sapiens | Q9ULX6 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | AKAP8L | Homo sapiens | Q9ULX6 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | MYC | Homo sapiens | P01106 | 23079660 | |
|
Intra
|
HDAC3 | O15379 | MYC | Homo sapiens | P01106 | 23079660 | |
|
Intra
|
HDAC3 | O15379 | MAGEA2 | Homo sapiens | P43356 | 16847267 | |
|
Intra
|
HDAC3 | O15379 | PGK1 | Homo sapiens | P00558 | 26356530 | |
|
Intra
|
HDAC3 | O15379 | PGK1 | Homo sapiens | P00558 | 26356530 | |
|
Intra
|
HDAC3 | O15379 | KDM1A | Homo sapiens | O60341 | 23752268 | |
|
Intra
|
HDAC3 | O15379 | KDM1A | Homo sapiens | O60341 | 23752268 | |
|
Intra
|
HDAC3 | O15379 | KDM1A | Homo sapiens | O60341 | 21258344 | |
|
Intra
|
HDAC3 | O15379 | GPS2 | Homo sapiens | Q13227 | 23752268 | |
|
Intra
|
HDAC3 | O15379 | GPS2 | Homo sapiens | Q13227 | 21258344 | |
|
Intra
|
HDAC3 | O15379 | GPS2 | Homo sapiens | Q13227 | 35271311 | |
|
Intra
|
HDAC3 | O15379 | GPS2 | Homo sapiens | Q13227 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | L3MBTL2 | Homo sapiens | Q969R5 | 20385135 | |
|
Intra
|
HDAC3 | O15379 | L3MBTL2 | Homo sapiens | Q969R5 | 20385135 | |
|
Intra
|
HDAC3 | O15379 | APPL1 | Homo sapiens | Q9UKG1 | 23752268 | |
|
Intra
|
HDAC3 | O15379 | APPL1 | Homo sapiens | Q9UKG1 | 23752268 | |
|
Intra
|
HDAC3 | O15379 | NRIP1 | Homo sapiens | P48552 | 17053781 | |
|
Intra
|
HDAC3 | O15379 | NRIP1 | Homo sapiens | P48552 | 17053781 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 22230954 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 22230954 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 21624135 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 21258344 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 22230954 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 22230954 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 23752268 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 35271311 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 16980585 | |
|
Intra
|
HDAC3 | O15379 | NCOR2 | Homo sapiens | Q9Y618 | 16924111 | |
|
Intra
|
HDAC3 | O15379 | MBD1 | Homo sapiens | Q9UIS9 | 16432238 | |
|
Cross
|
HDAC3 | O15379 | ICP0 | Human herpesvirus 1 | P08393 | 15194749 | |
|
Cross
|
HDAC3 | O15379 | ICP0 | Human herpesvirus 1 | P08393 | 15194749 |
HDAC3 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P80152 | HDAC3 Antibody (YA392) | WB, ICC/IF, IHC-P, IP | Human, Mouse, Rat |
| HY-P85198 | HDAC3 Antibody (YA4890) | WB, ICC/IF, ELISA | Human, Mouse |
| HY-P85198A | HDAC3 Antibody (YA4890)(PBS only) | WB, ICC/IF, ELISA | Human, Mouse |
| HY-P85432 | HDAC3 Antibody (YA5124) | WB | Human, Mouse, Rat, Dog, Pig, Rabbit |
| HY-P85562 | HDAC3 Antibody (YA5254) | WB | Human, Mouse, Rat |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Optic Atrophy 10 With Or Without Ataxia, Mental Retardation, And Seizures |
|
|
| Retinoblastoma |
|
|
| Rett Syndrome |
|
|
| Acute Promyelocytic Leukemia |
|
|
| Burkitt Lymphoma |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Felis catus | HDAC3 | VGNC | VGNC:67549 |
| Canis familiaris | HDAC3 | VGNC | VGNC:50628 |
| Rattus norvegicus | HDAC3 | RGD | RGD:619977 |
| Mus musculus | HDAC3 | MGD | MGI:1343091 |
| Bos taurus | HDAC3 | VGNC | VGNC:106764 |
| Macaca mulatta | HDAC3 | VGNC | VGNC:73359 |
| Others | HDAC3 | NCBI |