Nlrp3 - NLR family, pyrin domain containing 3 Gene
Also Known as Cias1
Species: Rattus norvegicus
About Nlrp3
This gene has 2 transcripts (splice variants), 87 orthologues, 21 paralogues and is associated with 32 phenotypes. Biased expression in Spleen (RPKM 82.9), Lung (RPKM 27.1) and 8 other tissues.
Summary
Predicted to enable DNA-binding transcription factor binding activity; identical protein binding activity; and sequence-specific DNA binding activity. Involved in leukocyte migration involved in inflammatory response; response to ethanol; and response to organic cyclic compound. Predicted to be located in Golgi membrane and nucleus. Predicted to be part of NLRP3 inflammasome complex. Biomarker of alcoholic hepatitis. Human ortholog(s) of this gene implicated in CINCA Syndrome; Muckle-Wells syndrome; autosomal dominant nonsyndromic deafness 34; familial cold autoinflammatory syndrome 1; and urticaria. Orthologous to human NLRP3 (NLR family pyrin domain containing 3). [provided by Alliance of Genome Resources, Apr 2022]
Nlrp3 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_001191642.1 | NP_001178571.1 | NACHT, LRR and PYD domains-containing protein 3 |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in leukocyte migration involved in inflammatory response |
IEP
IEP: Inferred from expression pattern
|
27939985 | RGD |
| involved in response to ethanol |
IEP
IEP: Inferred from expression pattern
|
27939985 | RGD |
| involved in response to organic cyclic compound |
IEP
IEP: Inferred from expression pattern
|
27939985 | RGD |
Nlrp3 Protein Structure
Pyrin_NALPs: cd08320 (9 - 89)
FISNA: pfam14484 (137 - 207)
NACHT: pfam05729 (217 - 386)
NOD2_WH: pfam17779 (461 - 517)
LRR_RI: cd00116 (574 - 951)
LRR_RI: sd00033 (741 - 769)
LRR_RI: sd00033 (770 - 797)
LRR_RI: sd00033 (798 - 826)
LRR_RI: sd00033 (827 - 854)
LRR_RI: sd00033 (855 - 883)
LRR_RI: sd00033 (884 - 911)
LRR_RI: sd00033 (912 - 936)
LRR_RI: sd00033 (941 - 968)
LRR_RI: smart00368 (966 - 993)
LRR_RI: sd00033 (969 - 993)
- 0
- 200
- 400
- 600
- 800
- 1035 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
NACHT, LRR and PYD domains-containing protein 3 |
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