HDAC6 - histone deacetylase 6 Gene
Species: Rattus norvegicus
About HDAC6
This gene has 3 transcripts (splice variants), 182 orthologues, 12 paralogues and is associated with 19 phenotypes.
Summary
Enables deacetylase activity. Involved in several processes, including generation of neurons; regulation of protein modification process; and response to glucocorticoid. Located in axon and centrosome. Used to study polycystic kidney disease and polycystic liver disease. Biomarker of hypertension and polycystic liver disease. Human ortholog(s) of this gene implicated in chondrodysplasia with platyspondyly, distinctive brachydactyly, hydrocephaly, and microphthalmia. Orthologous to human HDAC6 (histone deacetylase 6). [provided by Alliance of Genome Resources, Apr 2022]
HDAC6 Products (4)
| mRNA | Protein | Name |
|---|---|---|
| XM_006256758.3 | XP_006256820.1 | histone deacetylase 6 |
| XM_003752010.4 | XP_003752058.1 | histone deacetylase 6 |
| XM_039100468.1 | XP_038956396.1 | histone deacetylase 6 |
| XM_006256759.4 | XP_006256821.1 | histone deacetylase 6 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables deacetylase activity |
IDA
IDA: Inferred from direct assay
|
23868068 | RGD |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
19167333 | RGD |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in axon |
IDA
IDA: Inferred from direct assay
|
22937007 | RGD |
| located in centrosome |
IDA
IDA: Inferred from direct assay
|
19167333 | RGD |
HDAC6 Protein Structure
Arginase_HDAC: cl17011 (97 - 433)
HDAC6-dom2: cd10003 (483 - 833)
zf-UBP: pfam02148 (1069 - 1131)
- 0
- 200
- 400
- 600
- 800
- 1000
- 1152 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
histone deacetylase 6 |
|